Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-354P-201ENST00000383862 107 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 RNU6-610P-201ENST00000384264 107 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
COL12A1Q99715 RPS3AP3-201ENST00000411933 242 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 AL359672.1-201ENST00000442302 409 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 MTND1P33-201ENST00000446251 917 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.14□□□□□ -2.59
COL12A1Q99715 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 MIR4264-201ENST00000583520 66 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 AC110760.3-201ENST00000598794 467 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 RNU6-208P-201ENST00000362431 107 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 RNU4-15P-201ENST00000362613 141 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 RNU2-9P-201ENST00000410194 145 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 RNU7-62P-201ENST00000458856 62 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 RNU2-10P-201ENST00000516375 211 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.14□□□□□ -2.59
COL12A1Q99715 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.14□□□□□ -2.59
COL12A1Q99715 AC126544.2-201ENST00000625174 749 ntBASIC-1.14□□□□□ -2.59
COL12A1Q99715 SNORD14.1-201ENST00000365609 90 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 AL353691.2-201ENST00000443795 59 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 AC020550.1-201ENST00000447385 163 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 OR4H6P-202ENST00000603819 340 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 RNU6-125P-201ENST00000384505 107 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
COL12A1Q99715 BX119904.4-201ENST00000424402 301 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 RNU2-11P-201ENST00000459191 187 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 MIR4308-201ENST00000580634 81 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 AC073648.5-201ENST00000603502 305 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 AP001033.2-201ENST00000609701 1003 ntBASIC-1.15□□□□□ -2.59
COL12A1Q99715 RNU6-545P-201ENST00000362681 104 ntBASIC-1.16□□□□□ -2.59
COL12A1Q99715 SNORA63.5-201ENST00000363548 123 ntBASIC-1.16□□□□□ -2.59
COL12A1Q99715 RNU4-50P-201ENST00000364361 141 ntBASIC-1.16□□□□□ -2.59
COL12A1Q99715 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.16□□□□□ -2.59
COL12A1Q99715 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.16□□□□□ -2.59
COL12A1Q99715 AC084290.1-201ENST00000434995 374 ntBASIC-1.16□□□□□ -2.59
COL12A1Q99715 RNU6-528P-201ENST00000516926 100 ntBASIC-1.16□□□□□ -2.59
COL12A1Q99715 U6.107-201ENST00000637108 79 ntBASIC-1.16□□□□□ -2.59
COL12A1Q99715 RNU6-948P-201ENST00000516374 107 ntBASIC-1.16□□□□□ -2.6
COL12A1Q99715 SNORA31.19-201ENST00000517079 126 ntBASIC-1.16□□□□□ -2.6
COL12A1Q99715 MIR4490-201ENST00000582647 84 ntBASIC-1.16□□□□□ -2.6
COL12A1Q99715 RPL17P51-201ENST00000605218 238 ntBASIC-1.16□□□□□ -2.6
COL12A1Q99715 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.16□□□□□ -2.6
COL12A1Q99715 AC092608.3-201ENST00000625017 386 ntBASIC-1.16□□□□□ -2.6
COL12A1Q99715 AC027279.3-201ENST00000625055 122 ntBASIC-1.16□□□□□ -2.6
COL12A1Q99715 MIR20A-201ENST00000362279 71 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 MRPL42P3-201ENST00000401492 326 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 MIR1253-201ENST00000408273 105 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 RNU2-54P-201ENST00000410299 190 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC090960.1-201ENST00000421072 306 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AL353572.1-201ENST00000442490 417 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC090616.4-201ENST00000448026 115 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC009902.1-201ENST00000519351 183 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.17□□□□□ -2.6
COL12A1Q99715 U6.108-201ENST00000637764 58 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
COL12A1Q99715 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC005002.2-201ENST00000438228 269 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 MTND1P26-201ENST00000440488 538 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC079781.2-201ENST00000446424 169 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 RPL30P10-201ENST00000488148 337 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 FGF7P4-201ENST00000509595 295 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.17□□□□□ -2.6
COL12A1Q99715 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.17□□□□□ -2.6
COL12A1Q99715 PART1_1.1-201ENST00000611761 217 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 RNA5SP390-201ENST00000410191 113 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.17□□□□□ -2.6
COL12A1Q99715 SNRPGP10-201ENST00000432323 225 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 SNRPGP14-201ENST00000435400 219 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 RPL39P25-201ENST00000449384 154 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 MTND3P4-201ENST00000453537 303 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 FABP5P15-201ENST00000453566 214 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC112206.4-201ENST00000515142 405 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.17□□□□□ -2.6
COL12A1Q99715 VN1R87P-201ENST00000596706 487 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC145423.2-201ENST00000610631 239 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC093783.1-201ENST00000612976 329 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AL138960.2-201ENST00000625145 535 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 AC132825.7-201ENST00000638744 335 ntBASIC-1.17□□□□□ -2.6
COL12A1Q99715 SNORD115-21-201ENST00000362963 81 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 SNORA18-201ENST00000384416 132 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 SNORD65.1-201ENST00000390889 71 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 MTATP6P13-201ENST00000438531 667 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 uc_338.4-201ENST00000616635 176 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 SNORD115-4-201ENST00000363810 82 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms