Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 Y_RNA.143-201ENST00000363520 106 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 SNORD51-201ENST00000384320 80 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 MT-TF-201ENST00000387314 71 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 AC011373.1-201ENST00000607270 237 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 AL008636.1-201ENST00000625038 1018 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 AL035461.1-201ENST00000421490 332 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 ZNF114P1-201ENST00000453500 292 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 FGF7P4-201ENST00000509595 295 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 RNU2-34P-201ENST00000516534 121 ntBASIC-2.65□□□□□ -2.83
VPS13AQ96RL7 MRPL42P3-201ENST00000401492 326 ntBASIC-2.66□□□□□ -2.84
VPS13AQ96RL7 MTND3P17-201ENST00000416968 344 ntBASIC-2.66□□□□□ -2.84
VPS13AQ96RL7 RNU6-856P-201ENST00000516959 98 ntBASIC-2.66□□□□□ -2.84
VPS13AQ96RL7 RNU6-101P-201ENST00000410323 104 ntBASIC-2.66□□□□□ -2.84
VPS13AQ96RL7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-2.66□□□□□ -2.84
VPS13AQ96RL7 DPPA3P3-201ENST00000603842 430 ntBASIC-2.66□□□□□ -2.84
VPS13AQ96RL7 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 RNU6-1116P-201ENST00000517269 99 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 MIR548AR-201ENST00000582191 57 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 AL138889.2-201ENST00000603883 242 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 AL603914.1-201ENST00000401964 204 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 RNU6-1194P-201ENST00000516208 104 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 RNU7-161P-201ENST00000517289 62 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 RNU6-865P-201ENST00000364772 107 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 Y_RNA.539-201ENST00000384635 107 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 RNU6-592P-201ENST00000411333 103 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 RPP40P1-201ENST00000426762 456 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 YWHAEP2-201ENST00000580066 112 ntBASIC-2.67□□□□□ -2.84
VPS13AQ96RL7 RNU6-212P-201ENST00000362642 104 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 RNU6-1200P-201ENST00000384162 107 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 MIR136-201ENST00000385207 82 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 AL451054.2-201ENST00000420896 202 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 SNORA62.4-201ENST00000365504 151 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 AC013262.1-201ENST00000426710 252 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 AL137161.1-201ENST00000532231 390 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 BNIP3P9-201ENST00000603714 553 ntBASIC-2.68□□□□□ -2.84
VPS13AQ96RL7 AL589826.1-201ENST00000340697 249 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 Y_RNA.199-201ENST00000364014 102 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 AL359880.1-201ENST00000621879 266 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 SNRPGP14-201ENST00000435400 219 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 RNU6-1115P-201ENST00000362490 106 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 RNU4-20P-201ENST00000365601 151 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 RNU7-14P-201ENST00000459331 62 ntBASIC-2.69□□□□□ -2.84
VPS13AQ96RL7 RNU2-47P-201ENST00000410649 186 ntBASIC-2.7□□□□□ -2.84
VPS13AQ96RL7 RNU7-104P-201ENST00000459398 79 ntBASIC-2.7□□□□□ -2.84
VPS13AQ96RL7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-2.7□□□□□ -2.84
VPS13AQ96RL7 RNU6-658P-201ENST00000384606 106 ntBASIC-2.7□□□□□ -2.84
VPS13AQ96RL7 SNRPGP1-201ENST00000553864 222 ntBASIC-2.7□□□□□ -2.84
VPS13AQ96RL7 MIR548AE1-201ENST00000583292 70 ntBASIC-2.7□□□□□ -2.84
VPS13AQ96RL7 Z99497.2-201ENST00000603634 310 ntBASIC-2.7□□□□□ -2.84
VPS13AQ96RL7 SNORD115-4-201ENST00000363810 82 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 MIR548I3-201ENST00000408378 149 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 AC091951.3-201ENST00000504093 246 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 AL121655.1-201ENST00000605811 308 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 AC138649.3-201ENST00000622154 254 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 RNU6-141P-201ENST00000410499 105 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 AC069113.1-201ENST00000517763 267 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 RNU6-512P-201ENST00000364438 103 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 GPM6BP2-201ENST00000432046 144 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 GPM6BP1-201ENST00000446387 144 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 RPL30P10-201ENST00000488148 337 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 AC025459.1-201ENST00000504072 156 ntBASIC-2.71□□□□□ -2.84
VPS13AQ96RL7 AC090960.1-201ENST00000421072 306 ntBASIC-2.72□□□□□ -2.84
VPS13AQ96RL7 RNU6-1069P-201ENST00000516612 133 ntBASIC-2.72□□□□□ -2.84
VPS13AQ96RL7 MIR6740-201ENST00000618268 113 ntBASIC-2.72□□□□□ -2.84
VPS13AQ96RL7 AL159972.1-201ENST00000625150 448 ntBASIC-2.72□□□□□ -2.84
VPS13AQ96RL7 MIRLET7C-201ENST00000362160 84 ntBASIC-2.72□□□□□ -2.85
VPS13AQ96RL7 AC090844.1-201ENST00000422019 156 ntBASIC-2.72□□□□□ -2.85
VPS13AQ96RL7 AC016632.1-201ENST00000503994 196 ntBASIC-2.72□□□□□ -2.85
VPS13AQ96RL7 RNU2-56P-201ENST00000516826 190 ntBASIC-2.72□□□□□ -2.85
VPS13AQ96RL7 VN1R87P-201ENST00000596706 487 ntBASIC-2.72□□□□□ -2.85
VPS13AQ96RL7 AL359881.1-201ENST00000602916 267 ntBASIC-2.72□□□□□ -2.85
VPS13AQ96RL7 AC120024.3-201ENST00000603167 156 ntBASIC-2.72□□□□□ -2.85
VPS13AQ96RL7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-2.72□□□□□ -2.85
VPS13AQ96RL7 RNU6-1266P-201ENST00000362794 105 ntBASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 RNU7-28P-201ENST00000516759 62 ntBASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 RPL17P51-201ENST00000605218 238 ntBASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 AC068880.4-201ENST00000623082 495 ntBASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 Y_RNA.407-201ENST00000383986 113 ntBASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 RNU6-708P-201ENST00000384217 107 ntBASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 RNU6-549P-201ENST00000384433 107 ntBASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 BNIP3P40-201ENST00000596017 556 ntBASIC-2.73□□□□□ -2.85
VPS13AQ96RL7 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.74□□□□□ -2.85
VPS13AQ96RL7 AC117470.1-201ENST00000381974 330 ntBASIC-2.74□□□□□ -2.85
VPS13AQ96RL7 RNU6-1026P-201ENST00000384465 108 ntBASIC-2.74□□□□□ -2.85
VPS13AQ96RL7 MTCO1P31-201ENST00000506355 492 ntBASIC-2.74□□□□□ -2.85
VPS13AQ96RL7 RNU6-924P-201ENST00000362926 108 ntBASIC-2.75□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms