Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-1323P-201ENST00000384025 107 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 MIR548I3-201ENST00000408378 149 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 MIR548I1-201ENST00000408810 149 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 RNA5SP501-201ENST00000410990 112 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.3□□□□□ -2.2
ZIM3Q96PE6 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 COX6CP14-201ENST00000469580 174 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 RPS27P22-201ENST00000478056 241 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 SCARNA8-201ENST00000515924 131 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 RN7SKP179-201ENST00000516126 217 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 RNU7-172P-201ENST00000517125 64 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AC022559.1-201ENST00000520905 205 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.3□□□□□ -2.2
ZIM3Q96PE6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AC024405.2-202ENST00000532731 184 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AC127455.1-201ENST00000565496 145 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 SUB1P4-201ENST00000566062 339 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 MIR5692C2-201ENST00000577959 77 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AL512605.2-201ENST00000592972 256 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AL929325.1-201ENST00000603096 117 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AC073413.2-201ENST00000604332 360 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AL021707.8-201ENST00000609428 183 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 AC073349.3-201ENST00000617616 186 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ZIM3Q96PE6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ZIM3Q96PE6 RNU6-682P-201ENST00000363843 106 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.200-201ENST00000364018 102 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 SNORA63D-201ENST00000364359 132 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 RNU6-514P-201ENST00000384208 107 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.785-201ENST00000384290 109 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 RNU6-296P-201ENST00000384608 107 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
ZIM3Q96PE6 SNORA48.1-201ENST00000390879 135 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 MTCO2P33-201ENST00000402100 465 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.590-201ENST00000410140 107 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 RNU6-710P-201ENST00000410424 105 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 RNU6-847P-201ENST00000411115 108 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.29□□□□□ -2.2
ZIM3Q96PE6 CST2P1-201ENST00000425770 87 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 snoU13.15-201ENST00000459407 104 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 AC091021.1-201ENST00000468051 388 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 AC117454.1-201ENST00000491120 168 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 AL163195.1-201ENST00000496941 348 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 SNORA70.12-201ENST00000516084 153 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 RNU7-99P-201ENST00000516271 62 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 SNORA31.10-201ENST00000516482 106 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 AC005786.1-201ENST00000588553 154 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 MIR548AY-201ENST00000617669 107 ntBASIC1.29□□□□□ -2.2
ZIM3Q96PE6 RNU6-136P-201ENST00000384663 107 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 RNU11-3P-201ENST00000391111 133 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 RNU6-381P-201ENST00000391259 108 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 HMGN2P23-201ENST00000456759 269 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.28□□□□□ -2.2
ZIM3Q96PE6 RNA5SP437-201ENST00000517249 129 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 AL137100.2-201ENST00000555786 315 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 AC005972.2-201ENST00000604690 348 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 AC037487.3-201ENST00000606668 112 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 AC068647.2-201ENST00000637380 353 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.199-201ENST00000364014 102 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.297-201ENST00000364950 91 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 SNORA4.2-201ENST00000365313 147 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 MIR626-201ENST00000385032 94 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 RNA5SP109-201ENST00000391010 116 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 MIR1289-2-201ENST00000408360 111 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 SNORA36B-201ENST00000410438 131 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 RNU6-383P-201ENST00000410864 94 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 RNA5SP100-201ENST00000410903 110 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 RNA5SP59-201ENST00000410922 110 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.27□□□□□ -2.21
ZIM3Q96PE6 RNU6-453P-201ENST00000516819 85 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 AP005660.1-201ENST00000522972 293 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.27□□□□□ -2.21
ZIM3Q96PE6 AC084364.2-201ENST00000546924 395 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 MIR5094-201ENST00000578766 85 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 AL359075.3-201ENST00000613288 217 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.27□□□□□ -2.21
ZIM3Q96PE6 AC018630.2-201ENST00000534866 2403 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 MIR424-201ENST00000362227 98 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 SNORA1B-201ENST00000362535 133 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.83-201ENST00000363005 113 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 RNU6-112P-201ENST00000363599 104 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 RNU6-674P-201ENST00000363831 107 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 RNU6-899P-201ENST00000363947 107 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 RNU6-923P-201ENST00000364753 107 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 RNU6-969P-201ENST00000383900 105 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 RNU6-1248P-201ENST00000391096 64 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 RNU6-493P-201ENST00000391321 108 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 HSPE1P9-201ENST00000440046 311 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 SNORD13-201ENST00000459299 104 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms