Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC104695.3-201ENST00000604052 296 ntBASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 MIR4251-201ENST00000635819 61 ntBASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.3-201ENST00000362331 103 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.88-201ENST00000363029 99 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.453-201ENST00000384223 109 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 RNU6-994P-201ENST00000410507 111 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 SNRPGP10-201ENST00000432323 225 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 CHEK2P4-201ENST00000450340 246 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 AL355375.2-201ENST00000574825 175 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 MIR548AR-201ENST00000582191 57 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.168-201ENST00000363740 102 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.368-201ENST00000365547 113 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 SNORD28B-201ENST00000390993 75 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 RNU6-131P-201ENST00000391144 107 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.592-201ENST00000410274 109 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 RNA5SP222-201ENST00000411039 105 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 MLLT10P1-201ENST00000418346 262 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 AC107399.1-201ENST00000451226 265 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 MIR2053-201ENST00000459295 91 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 RNU6-830P-201ENST00000516353 107 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 RNU6-966P-201ENST00000516479 104 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 RNU6-307P-201ENST00000516743 106 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 AC080013.6-201ENST00000606185 215 ntBASIC0.36□□□□□ -2.35
ECHDC3Q96DC8 RNU6-99P-201ENST00000364721 107 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.370-201ENST00000365589 108 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.436-201ENST00000384097 102 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.516-201ENST00000384541 124 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.540-201ENST00000384638 111 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 SNORD115-47-201ENST00000391226 86 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 SNORA75.4-201ENST00000391278 119 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 SNRPGP14-201ENST00000435400 219 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 AC093534.1-201ENST00000504977 132 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 AC091925.1-201ENST00000623204 462 ntBASIC0.35□□□□□ -2.35
ECHDC3Q96DC8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
ECHDC3Q96DC8 Y_RNA.86-201ENST00000363020 111 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 RNU6-580P-201ENST00000365159 107 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 RNY1P8-201ENST00000383970 114 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 SNORA36.2-201ENST00000384004 127 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.446-201ENST00000384178 104 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 RNY3P4-201ENST00000384428 101 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.577-201ENST00000384794 101 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 MTCO2P27-201ENST00000420740 428 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 FCF1P4-201ENST00000448326 183 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 AC092989.1-201ENST00000481235 277 ntBASIC0.34□□□□□ -2.36
ECHDC3Q96DC8 MIR1-1-201ENST00000362147 71 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 RNU6-623P-201ENST00000363143 105 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.146-201ENST00000363549 102 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 RNU6-1323P-201ENST00000384025 107 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 SNORA2B-201ENST00000384583 137 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 SNORA69.1-201ENST00000390904 137 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 RNA5SP95-201ENST00000410319 137 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 AC016907.1-201ENST00000419483 435 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 MIR2115-201ENST00000516657 100 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.714-201ENST00000517065 90 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 MIR1273G-201ENST00000577677 100 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 AL355073.2-201ENST00000612106 557 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 AC002553.4-201ENST00000616896 331 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 PISRT1.1-201ENST00000616930 107 ntBASIC0.33□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.148-201ENST00000363557 117 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 RNU6-20P-201ENST00000384106 107 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 MIR573-201ENST00000384964 99 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 AC093027.1-201ENST00000546698 429 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 MIR4300-201ENST00000581016 96 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 AC005176.2-201ENST00000596933 147 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 AC022441.3-201ENST00000605737 136 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 MIR6779-201ENST00000617283 64 ntBASIC0.32□□□□□ -2.36
ECHDC3Q96DC8 MIR377-201ENST00000362145 69 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 RNU6-626P-201ENST00000363354 107 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 RNU6-926P-201ENST00000384075 107 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 MT-TN-201ENST00000387400 73 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 RNU6-192P-201ENST00000391253 100 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 MIR1277-201ENST00000408536 78 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 RNU6-1156P-201ENST00000410365 100 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 AC005534.2-201ENST00000431047 433 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 AC005730.3-201ENST00000583067 366 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 AC087685.1-201ENST00000587507 141 ntBASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.31□□□□□ -2.36
ECHDC3Q96DC8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms