Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 Y_RNA.579-201ENST00000390939 94 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 MTND1P14-201ENST00000427400 950 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 SNRPGP10-201ENST00000432323 225 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 OR2A41P-201ENST00000473586 105 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 RNU6-475P-201ENST00000516073 104 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 POLR3GP1-201ENST00000594073 261 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 DEFB117-201ENST00000602356 141 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 AC136443.5-201ENST00000603741 370 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 SNORD58B-201ENST00000607313 66 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 AC007742.2-201ENST00000618226 398 ntBASIC1.26□□□□□ -2.21
SKA1Q96BD8 Y_RNA.310-201ENST00000365063 113 ntBASIC1.25□□□□□ -2.21
SKA1Q96BD8 AC117470.1-201ENST00000381974 330 ntBASIC1.25□□□□□ -2.21
SKA1Q96BD8 AC022028.1-201ENST00000412054 408 ntBASIC1.25□□□□□ -2.21
SKA1Q96BD8 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
SKA1Q96BD8 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
SKA1Q96BD8 HSPE1P19-201ENST00000603327 295 ntBASIC1.25□□□□□ -2.21
SKA1Q96BD8 AL096861.1-201ENST00000610899 123 ntBASIC1.25□□□□□ -2.21
SKA1Q96BD8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.25□□□□□ -2.21
SKA1Q96BD8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
SKA1Q96BD8 AL391516.1-201ENST00000554380 2449 ntBASIC1.24□□□□□ -2.21
SKA1Q96BD8 RNU6-53P-201ENST00000365367 106 ntBASIC1.24□□□□□ -2.21
SKA1Q96BD8 SNORD14.1-201ENST00000365609 90 ntBASIC1.24□□□□□ -2.21
SKA1Q96BD8 Y_RNA.471-201ENST00000384312 102 ntBASIC1.24□□□□□ -2.21
SKA1Q96BD8 RNY1P14-201ENST00000384426 108 ntBASIC1.24□□□□□ -2.21
SKA1Q96BD8 MIR516B2-201ENST00000385190 85 ntBASIC1.24□□□□□ -2.21
SKA1Q96BD8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.24□□□□□ -2.21
SKA1Q96BD8 AC245047.8-201ENST00000456455 284 ntBASIC1.24□□□□□ -2.21
SKA1Q96BD8 AC040926.1-201ENST00000530195 238 ntBASIC1.24□□□□□ -2.21
SKA1Q96BD8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
SKA1Q96BD8 Y_RNA.431-201ENST00000384086 102 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 RNU6-937P-201ENST00000384325 106 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 UBL5P1-201ENST00000507979 193 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 SNORA74.3-201ENST00000517108 154 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 AP003357.1-201ENST00000604497 148 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 AL133255.1-201ENST00000606374 441 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 AL391903.3-201ENST00000612158 163 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 JPX_2.1-201ENST00000614161 69 ntBASIC1.23□□□□□ -2.21
SKA1Q96BD8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.23□□□□□ -2.21
SKA1Q96BD8 Y_RNA.80-201ENST00000362996 102 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 SNORD81.1-201ENST00000363064 77 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 Y_RNA.112-201ENST00000363250 102 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 Y_RNA.143-201ENST00000363520 106 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 Y_RNA.485-201ENST00000384395 102 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 MIR520C-201ENST00000385005 87 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 RNU6-1248P-201ENST00000391096 64 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 AL590004.1-201ENST00000405321 300 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.22□□□□□ -2.21
SKA1Q96BD8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.22□□□□□ -2.21
SKA1Q96BD8 AC024405.2-202ENST00000532731 184 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 MIR4661-201ENST00000582720 75 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 SNORA4-201ENST00000584302 138 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 AL080274.1-201ENST00000605565 220 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 MIR6734-201ENST00000621166 68 ntBASIC1.22□□□□□ -2.21
SKA1Q96BD8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.21□□□□□ -2.22
SKA1Q96BD8 SNORD14E-201ENST00000364009 85 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 Y_RNA.203-201ENST00000364106 102 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 SNORD50B-201ENST00000364995 70 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 SNORD114-24-201ENST00000365029 72 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 Y_RNA.424-201ENST00000384063 103 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 MIR1302-11-201ENST00000408051 138 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 MIR1302-9-201ENST00000408365 138 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 MIR1302-10-201ENST00000408734 138 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 RNU4-30P-201ENST00000410245 143 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 COX6CP14-201ENST00000469580 174 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 HMGN1P10-201ENST00000474557 553 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 RPL23AP54-201ENST00000495129 419 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 SEPT14P8-201ENST00000508026 178 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 AC090142.3-201ENST00000519012 385 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SKA1Q96BD8 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 AC087685.1-201ENST00000587507 141 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 MIR1302-2-201ENST00000607096 138 ntBASIC1.21□□□□□ -2.22
SKA1Q96BD8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
SKA1Q96BD8 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 POLR2KP2-201ENST00000438155 177 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.2□□□□□ -2.22
SKA1Q96BD8 AC127455.1-201ENST00000565496 145 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 AC136932.1-201ENST00000574771 208 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 AP001094.1-201ENST00000579805 193 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 SNORD113-5-201ENST00000607261 78 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 MIR548AY-201ENST00000617669 107 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
SKA1Q96BD8 MIR802-201ENST00000390235 94 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 RNU7-21P-201ENST00000459430 62 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 AC117454.1-201ENST00000491120 168 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.19□□□□□ -2.22
SKA1Q96BD8 RNU7-115P-201ENST00000516433 55 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 RNU7-43P-201ENST00000516554 64 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 SNORA18.7-201ENST00000516910 131 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 MIR2681-201ENST00000581814 105 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 MIR3192-201ENST00000584920 77 ntBASIC1.19□□□□□ -2.22
SKA1Q96BD8 LARP7P1-201ENST00000605576 316 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms