Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 Y_RNA.286-201ENST00000364813 102 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.331-201ENST00000365267 102 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 RNY1P14-201ENST00000384426 108 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-1105P-201ENST00000384774 107 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.579-201ENST00000390939 94 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-130P-201ENST00000411112 103 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 AC005042.3-201ENST00000453230 174 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 RPL39P39-201ENST00000455840 151 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 AC245047.8-201ENST00000456455 284 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 RNU7-21P-201ENST00000459430 62 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 AC007485.1-201ENST00000616755 206 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.70-201ENST00000362886 110 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.263-201ENST00000364659 114 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 U8.7-201ENST00000364940 136 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 SNORA72-201ENST00000384339 132 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 SNORA80D-201ENST00000384488 135 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 MIR452-201ENST00000385020 85 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 MIR100-201ENST00000385259 80 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 MIR1276-201ENST00000408707 83 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 MIR1278-201ENST00000408753 81 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 AC006461.1-201ENST00000412637 326 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 MIR4795-201ENST00000584182 89 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 AC010205.1-201ENST00000616668 449 ntBASIC0.62□□□□□ -2.31
RTN4IP1Q8WWV3 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.143-201ENST00000363520 106 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.252-201ENST00000364556 101 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 AC117470.1-201ENST00000381974 330 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 MIR605-201ENST00000385078 83 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-1009P-201ENST00000390996 107 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 SNORD12-201ENST00000391002 90 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 MIR1185-1-201ENST00000408598 86 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 RNU2-14P-201ENST00000411053 191 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 AC004941.2-201ENST00000427009 228 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 AL160004.2-201ENST00000432935 350 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 RNU7-110P-201ENST00000516891 62 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 SNORA74.3-201ENST00000517108 154 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 AP003716.2-201ENST00000528260 108 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 AC024405.2-202ENST00000532731 184 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 MIR548S-201ENST00000581352 82 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 POLR3GP1-201ENST00000594073 261 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 RBM11P1-201ENST00000604951 799 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.804-201ENST00000615262 101 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 MIR8070-201ENST00000616510 88 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 AL606534.2-204ENST00000635008 178 ntBASIC0.61□□□□□ -2.31
RTN4IP1Q8WWV3 HSBP1P2-201ENST00000299671 229 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.4-201ENST00000362333 112 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 RNA5SP264-201ENST00000363115 107 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 RNU4-73P-201ENST00000363164 141 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-308P-201ENST00000390957 107 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 SNORD28B-201ENST00000390993 75 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-131P-201ENST00000391144 107 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 RNU2-64P-201ENST00000411315 191 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 MTND5P20-201ENST00000448677 143 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.702-201ENST00000516843 96 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 AC023827.1-201ENST00000569247 97 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 MIR4801-201ENST00000582704 82 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 AC136443.5-201ENST00000603741 370 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 AC006157.1-201ENST00000611750 366 ntBASIC0.6□□□□□ -2.31
RTN4IP1Q8WWV3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 AC134026.1-201ENST00000623249 2239 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 MIR103A2-201ENST00000362154 78 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.419-201ENST00000384041 102 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.551-201ENST00000384661 102 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 MIR520C-201ENST00000385005 87 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 MIR136-201ENST00000385207 82 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 SNORD123-201ENST00000459473 70 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 PDCD5P2-201ENST00000507570 312 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 RN7SKP164-201ENST00000516138 266 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 RNU7-115P-201ENST00000516433 55 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-1046P-201ENST00000516538 107 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-197P-201ENST00000516680 100 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 MIR4764-201ENST00000580680 88 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 AL133255.1-201ENST00000606374 441 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.772-201ENST00000606692 102 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 AC011373.1-201ENST00000607270 237 ntBASIC0.59□□□□□ -2.31
RTN4IP1Q8WWV3 AC068700.1-201ENST00000565862 3754 ntBASIC0.58□□□□□ -2.32
RTN4IP1Q8WWV3 Y_RNA.31-201ENST00000362574 102 ntBASIC0.58□□□□□ -2.32
RTN4IP1Q8WWV3 RNU4-80P-201ENST00000363200 141 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 377.9 ms