Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 SNORD24-201ENST00000383884 75 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 SNORD38C-201ENST00000384381 69 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 AC005326.1-201ENST00000429197 123 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 SNORD116-25-201ENST00000516517 92 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 SNORA44.1-201ENST00000517031 108 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 MIR378D2-201ENST00000580636 98 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 UBL5P2-201ENST00000583788 219 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 MIR92B-201ENST00000607575 96 ntBASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 SNORA71.3-201ENST00000362582 128 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 RNU6-1062P-201ENST00000383908 107 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 MIR452-201ENST00000385020 85 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 RNU6-394P-201ENST00000410735 107 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 SNRPGP13-201ENST00000442212 177 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 RN7SL863P-201ENST00000462370 296 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 RNA5SP356-201ENST00000515972 94 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 MIR8074-201ENST00000615081 81 ntBASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLRN3Q8NCR9 SNORA63.1-201ENST00000362493 131 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 Y_RNA.91-201ENST00000363042 107 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 MIR194-1-201ENST00000384892 85 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 AC004965.1-201ENST00000413033 213 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 MIR5004-201ENST00000579078 107 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 MTND1P7-201ENST00000632801 297 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLRN3Q8NCR9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 ZNF658B-202ENST00000615961 3375 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 RNU6-268P-201ENST00000364174 107 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 RNU6-449P-201ENST00000383914 107 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 RNU6-203P-201ENST00000384038 104 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 RNU6-439P-201ENST00000384188 106 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 Y_RNA.580-201ENST00000391004 95 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 SNRPGP14-201ENST00000435400 219 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 MIR3144-201ENST00000579460 79 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 AC104465.1-201ENST00000611365 139 ntBASIC2.06□□□□□ -2.08
CLRN3Q8NCR9 Y_RNA.66-201ENST00000362862 102 ntBASIC2.05□□□□□ -2.08
CLRN3Q8NCR9 Y_RNA.393-201ENST00000383936 102 ntBASIC2.05□□□□□ -2.08
CLRN3Q8NCR9 RNA5SP171-201ENST00000391071 115 ntBASIC2.05□□□□□ -2.08
CLRN3Q8NCR9 AL161935.2-201ENST00000414627 60 ntBASIC2.05□□□□□ -2.08
CLRN3Q8NCR9 RNU7-121P-201ENST00000516604 62 ntBASIC2.05□□□□□ -2.08
CLRN3Q8NCR9 MIR4635-201ENST00000583759 79 ntBASIC2.05□□□□□ -2.08
CLRN3Q8NCR9 DNAJC19P2-201ENST00000593340 302 ntBASIC2.05□□□□□ -2.08
CLRN3Q8NCR9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 RNU6-199P-201ENST00000362954 107 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 RNU6-888P-201ENST00000363010 101 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 RNU6-597P-201ENST00000365620 102 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 RNU6-851P-201ENST00000384565 107 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 RNVU1-14-201ENST00000384770 164 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 MIR548O-201ENST00000408583 114 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 MIR4778-201ENST00000577635 80 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLRN3Q8NCR9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 SNORD46.1-201ENST00000364139 104 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 RNU6-978P-201ENST00000364371 103 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 SNORA25.7-201ENST00000364375 127 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 SNORA71.1-201ENST00000364523 117 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 RNU6-804P-201ENST00000384286 107 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 MIR30A-201ENST00000385092 71 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 AC015922.2-201ENST00000435593 184 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 AC093850.1-201ENST00000454121 251 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 RNU6-693P-201ENST00000516134 107 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 MIR3646-201ENST00000578301 84 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 MIR7112-201ENST00000616126 65 ntBASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.03□□□□□ -2.08
CLRN3Q8NCR9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 Y_RNA.8-201ENST00000362353 102 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 SNORD116-18-201ENST00000383961 92 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 SNORD61-201ENST00000384252 73 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 Y_RNA.542-201ENST00000384641 111 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 MIR136-201ENST00000385207 82 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 COTL1P1-201ENST00000422309 375 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 AL513328.1-201ENST00000446460 224 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms