Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Y_RNA.82-201ENST00000363000 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.92-201ENST00000363043 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.235-201ENST00000364412 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 RNU6-740P-201ENST00000364734 105 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.306-201ENST00000365015 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.312-201ENST00000365089 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.322-201ENST00000365151 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.416-201ENST00000384014 113 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 SUMO2P12-201ENST00000405924 140 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.650-201ENST00000459002 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 AC008834.1-201ENST00000511612 175 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.679-201ENST00000516416 91 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.777-201ENST00000516982 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 AC005357.1-201ENST00000588399 301 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.771-201ENST00000598668 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 JPX_2.1-201ENST00000614161 69 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.789-201ENST00000622480 102 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 AC134026.1-201ENST00000623249 2239 ntBASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.54-201ENST00000362766 105 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 RNU4-41P-201ENST00000364426 143 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.401-201ENST00000383965 117 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 MIR194-1-201ENST00000384892 85 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 AL603910.2-201ENST00000407268 136 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.618-201ENST00000410949 107 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 AL161935.2-201ENST00000414627 60 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 AL603825.1-201ENST00000438481 80 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 snoU13.9-201ENST00000458927 103 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 OR9P1P-201ENST00000496431 281 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 AC107393.1-201ENST00000512403 346 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 RNU6-1007P-201ENST00000516586 107 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 MIR5688-201ENST00000580619 83 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 AC012493.3-201ENST00000604494 112 ntBASIC2.18□□□□□ -2.06
PRPF38AQ8NAV1 WWP1P1-201ENST00000466609 2769 ntBASIC2.17□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.253-201ENST00000364562 112 ntBASIC2.17□□□□□ -2.06
PRPF38AQ8NAV1 RNU6-211P-201ENST00000384047 107 ntBASIC2.17□□□□□ -2.06
PRPF38AQ8NAV1 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
PRPF38AQ8NAV1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 MIR126-201ENST00000362291 85 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 MIR367-201ENST00000362299 68 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 RNU1-17P-201ENST00000363022 152 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 SNORD68-201ENST00000363214 84 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 U8.5-201ENST00000364528 136 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.293-201ENST00000364908 93 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 AC004965.1-201ENST00000413033 213 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 AC003989.2-201ENST00000440224 169 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 SNORD2.1-201ENST00000458762 69 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 AC087685.1-201ENST00000587507 141 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 AL008718.3-201ENST00000610217 321 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 AL591926.4-201ENST00000616895 298 ntBASIC2.16□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.242-201ENST00000364473 110 ntBASIC2.15□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-574P-201ENST00000384265 107 ntBASIC2.15□□□□□ -2.07
PRPF38AQ8NAV1 Z98949.2-201ENST00000440996 144 ntBASIC2.15□□□□□ -2.07
PRPF38AQ8NAV1 AC023449.1-201ENST00000454464 154 ntBASIC2.15□□□□□ -2.07
PRPF38AQ8NAV1 MIR4724-201ENST00000579485 89 ntBASIC2.15□□□□□ -2.07
PRPF38AQ8NAV1 MIR4762-201ENST00000585261 75 ntBASIC2.15□□□□□ -2.07
PRPF38AQ8NAV1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
PRPF38AQ8NAV1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.117-201ENST00000363294 101 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-338P-201ENST00000383888 105 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-424P-201ENST00000384367 105 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 MIR660-201ENST00000385235 97 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-131P-201ENST00000391144 107 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 SNRPGP10-201ENST00000432323 225 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 CYCTP-201ENST00000504253 315 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 RNA5SP168-201ENST00000516642 112 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 MIR4282-201ENST00000583613 67 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.802-201ENST00000614892 130 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 SNORD3E-202ENST00000627253 216 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 ICE2P2-201ENST00000483823 2787 ntBASIC2.14□□□□□ -2.07
PRPF38AQ8NAV1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.20-201ENST00000362479 113 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 SNORD33-201ENST00000362761 85 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.277-201ENST00000364754 102 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 MIR9-3-201ENST00000385084 90 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 MIR526A2-201ENST00000390198 65 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 MIR3683-201ENST00000580847 82 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 AC006006.1-201ENST00000603082 144 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 MIR8063-201ENST00000621930 81 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 AC027279.3-201ENST00000625055 122 ntBASIC2.13□□□□□ -2.07
PRPF38AQ8NAV1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.122-201ENST00000363331 96 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.140-201ENST00000363474 103 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-969P-201ENST00000383900 105 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.489-201ENST00000384410 101 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 SNORA8.3-201ENST00000384679 139 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 RNA5SP496-201ENST00000391240 109 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 MIR934-201ENST00000401241 83 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 MLLT10P1-201ENST00000418346 262 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 HSPE1P24-201ENST00000450782 238 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-1023P-201ENST00000516137 106 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 RNA5SP458-201ENST00000516188 119 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 AC015688.6-201ENST00000577737 104 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms