Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL139396.1-201ENST00000421137 167 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 MTND1P29-201ENST00000448112 647 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 RPS29P25-201ENST00000481709 171 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 AC093534.1-201ENST00000504977 132 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 RNU6-977P-201ENST00000516411 103 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 AC023932.2-201ENST00000603176 175 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 AC004467.1-201ENST00000615678 330 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 AC240442.1-201ENST00000616055 283 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 MIR377-201ENST00000362145 69 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 SNORD44.1-201ENST00000363202 61 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 SNORD14E-201ENST00000364009 85 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 MIR570-201ENST00000384917 97 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.594-201ENST00000410373 140 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 SNORD71-201ENST00000411292 86 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 AL353997.1-201ENST00000432936 108 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 AC109635.3-201ENST00000529536 185 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 AP003327.1-201ENST00000529684 127 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 MIR3612-201ENST00000579753 87 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 MIR548AO-201ENST00000579992 96 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 MIR4514-201ENST00000581410 57 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 RBM11P1-201ENST00000604951 799 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
ZIC4Q8N9L1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 SNORA72-201ENST00000384339 132 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 MT-TN-201ENST00000387400 73 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 RNU2-54P-201ENST00000410299 190 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 AC074085.1-201ENST00000413598 418 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 AC015818.7-201ENST00000428754 109 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 AC087499.7-201ENST00000441958 109 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 RNU6-408P-201ENST00000515910 100 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 RNU6-830P-201ENST00000516353 107 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 RNU6-1016P-201ENST00000516689 94 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 AC078938.1-201ENST00000620993 318 ntBASIC0.1□□□□□ -2.39
ZIC4Q8N9L1 RNA5SP457-201ENST00000363657 124 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 RNU4-67P-201ENST00000364569 141 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 RNA5SP517-201ENST00000364724 117 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 RNA5SP63-201ENST00000391225 112 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 SNORD83.1-201ENST00000411362 77 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 BTF3P11-201ENST00000426582 477 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 SNRPGP12-201ENST00000449481 213 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 HMGN1P10-201ENST00000474557 553 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 RNU6-863P-201ENST00000515989 104 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 RNU6-436P-201ENST00000516171 114 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 SNORA25.12-201ENST00000516202 82 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 RNU6-506P-201ENST00000516553 94 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 AC022523.2-201ENST00000561045 150 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 MIR4790-201ENST00000577799 79 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 AP000753.3-201ENST00000604083 169 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 AC005972.2-201ENST00000604690 348 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 LARP7P1-201ENST00000605576 316 ntBASIC0.09□□□□□ -2.4
ZIC4Q8N9L1 RNA5SP62-201ENST00000363457 110 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 RNY4P14-201ENST00000363656 96 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 RNU6-934P-201ENST00000365154 107 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.402-201ENST00000383972 102 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.404-201ENST00000383978 102 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 SNORA51.10-201ENST00000384418 136 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 RNU6-125P-201ENST00000384505 107 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 MIR548K-201ENST00000408406 116 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 RNU6-1050P-201ENST00000410388 107 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 AL358176.2-201ENST00000425769 204 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 MTND3P21-201ENST00000433774 331 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 MTND2P22-201ENST00000444325 1033 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 CHEK2P4-201ENST00000450340 246 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 AC098826.2-201ENST00000452011 651 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 RNU2-13P-201ENST00000515909 113 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 RNU4-49P-201ENST00000516080 140 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.682-201ENST00000516457 100 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 MIR2355-201ENST00000517199 87 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 MIR4804-201ENST00000581683 73 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 AC020891.4-201ENST00000605745 93 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 uc_338.6-201ENST00000613544 171 ntBASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.08□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.2-201ENST00000362330 96 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.89-201ENST00000363031 102 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.157-201ENST00000363638 102 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 MIR518A1-201ENST00000385068 85 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 MIR802-201ENST00000390235 94 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 RNU6-205P-201ENST00000390858 107 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 SNORA40.8-201ENST00000411034 126 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 RPL30P15-201ENST00000457129 321 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 RNU7-56P-201ENST00000458744 62 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 RPL7P42-201ENST00000481005 679 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 RNU4-77P-201ENST00000516692 156 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 AC087685.1-201ENST00000587507 141 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms