Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC080128.1-201ENST00000474389 1917 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 RNA5SP289-201ENST00000362332 137 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 Y_RNA.120-201ENST00000363304 110 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 Y_RNA.388-201ENST00000383919 113 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 MIR586-201ENST00000385035 97 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 MLLT10P1-201ENST00000418346 262 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 RPS15AP28-201ENST00000435088 386 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.01□□□□□ -2.09
USP43Q70EL4 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 AC026436.1-201ENST00000510537 270 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.01□□□□□ -2.09
USP43Q70EL4 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.01□□□□□ -2.09
USP43Q70EL4 MIR4765-201ENST00000585007 77 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 AL670379.3-201ENST00000605040 251 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 AC025754.2-201ENST00000606491 432 ntBASIC2.01□□□□□ -2.09
USP43Q70EL4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.01□□□□□ -2.09
USP43Q70EL4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USP43Q70EL4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
USP43Q70EL4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.01□□□□□ -2.09
USP43Q70EL4 AC092881.1-201ENST00000638218 2733 ntBASIC2□□□□□ -2.09
USP43Q70EL4 RNU6-640P-201ENST00000363693 105 ntBASIC2□□□□□ -2.09
USP43Q70EL4 U8.6-201ENST00000364939 135 ntBASIC2□□□□□ -2.09
USP43Q70EL4 Y_RNA.348-201ENST00000365403 103 ntBASIC2□□□□□ -2.09
USP43Q70EL4 RNU6-484P-201ENST00000384016 107 ntBASIC2□□□□□ -2.09
USP43Q70EL4 RNU6-106P-201ENST00000384405 107 ntBASIC2□□□□□ -2.09
USP43Q70EL4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2□□□□□ -2.09
USP43Q70EL4 U6atac.2-201ENST00000408644 118 ntBASIC2□□□□□ -2.09
USP43Q70EL4 RPL23AP7-203ENST00000449021 469 ntBASIC2□□□□□ -2.09
USP43Q70EL4 RPS26P45-201ENST00000471748 340 ntBASIC2□□□□□ -2.09
USP43Q70EL4 AC117454.1-201ENST00000491120 168 ntBASIC2□□□□□ -2.09
USP43Q70EL4 AC234781.5-201ENST00000508429 271 ntBASIC2□□□□□ -2.09
USP43Q70EL4 RNU7-115P-201ENST00000516433 55 ntBASIC2□□□□□ -2.09
USP43Q70EL4 RNU6-1098P-201ENST00000516772 96 ntBASIC2□□□□□ -2.09
USP43Q70EL4 HSPE1P18-201ENST00000517602 280 ntBASIC2□□□□□ -2.09
USP43Q70EL4 Y_RNA.757-201ENST00000578934 114 ntBASIC2□□□□□ -2.09
USP43Q70EL4 RPL30P11-203ENST00000598995 310 ntBASIC2□□□□□ -2.09
USP43Q70EL4 AL031274.2-201ENST00000599419 203 ntBASIC2□□□□□ -2.09
USP43Q70EL4 AL021707.8-201ENST00000609428 183 ntBASIC2□□□□□ -2.09
USP43Q70EL4 SNORD114-7-201ENST00000362520 77 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 RNU1-72P-201ENST00000362976 153 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 RNU6-309P-201ENST00000364573 106 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 RNU6-32P-201ENST00000383948 107 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 RNU6-13P-201ENST00000384248 107 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 RNU6-12P-201ENST00000384604 107 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 RNU6-41P-201ENST00000384741 107 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 MIR29B2-201ENST00000385055 81 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 SNORA12.1-201ENST00000390873 148 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 MIR1185-2-201ENST00000408687 86 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 SNORA36B-201ENST00000410438 131 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 Y_RNA.622-201ENST00000411091 108 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 RN7SKP101-201ENST00000411376 320 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 RPL30P4-201ENST00000429309 333 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 AC245047.4-201ENST00000433189 144 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 HMGN2P9-201ENST00000476875 229 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 IGKV1-22-201ENST00000524313 326 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.99□□□□□ -2.09
USP43Q70EL4 AC091178.2-201ENST00000584401 117 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 uc_338.28-201ENST00000612082 187 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.99□□□□□ -2.09
USP43Q70EL4 AL591926.4-201ENST00000616895 298 ntBASIC1.99□□□□□ -2.09
USP43Q70EL4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USP43Q70EL4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.99□□□□□ -2.09
USP43Q70EL4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USP43Q70EL4 RNU1-91P-201ENST00000364746 163 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 SNORD116-13-201ENST00000384408 92 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 MIR218-1-201ENST00000384999 110 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 RNU6-220P-201ENST00000390919 107 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 AL603914.1-201ENST00000401964 204 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 AL355796.1-201ENST00000406706 323 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 RNY4P30-201ENST00000410216 95 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 HSPE1P21-201ENST00000438283 308 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 RPS29P24-201ENST00000486345 171 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 AC108210.2-201ENST00000503681 201 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 AL160236.1-201ENST00000556317 195 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 AC133485.4-201ENST00000561835 220 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 AC138907.4-201ENST00000570107 226 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 MIR3199-1-201ENST00000582434 88 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 AP003357.1-201ENST00000604497 148 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 MIR548AY-201ENST00000617669 107 ntBASIC1.98□□□□□ -2.09
USP43Q70EL4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.98□□□□□ -2.09
USP43Q70EL4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
USP43Q70EL4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
USP43Q70EL4 MIR367-201ENST00000362299 68 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 MIR548A1-201ENST00000385041 97 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 MIR548A3-201ENST00000385297 97 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 RNU6-482P-201ENST00000391068 107 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 RNU6-554P-201ENST00000410466 106 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 RNY4P29-201ENST00000410801 97 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 227.8 ms