Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 SNORA25.17-201ENST00000517184 124 ntBASIC-1.51□□□□□ -2.65
UBR3Q6ZT12 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.51□□□□□ -2.65
UBR3Q6ZT12 AP000942.4-201ENST00000604811 241 ntBASIC-1.51□□□□□ -2.65
UBR3Q6ZT12 RMST_3.1-201ENST00000611651 109 ntBASIC-1.51□□□□□ -2.65
UBR3Q6ZT12 AC103705.1-201ENST00000619013 241 ntBASIC-1.51□□□□□ -2.65
UBR3Q6ZT12 MTND5P18-201ENST00000445624 1801 ntBASIC-1.51□□□□□ -2.65
UBR3Q6ZT12 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 SNORA27.1-201ENST00000362604 124 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 RNU6-462P-201ENST00000362659 105 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 RNU6-926P-201ENST00000384075 107 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 RNU6-847P-201ENST00000411115 108 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AC010587.1-201ENST00000505809 469 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 BNIP3P40-201ENST00000596017 556 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AL662814.1-201ENST00000617364 121 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 RNU6-727P-201ENST00000363592 107 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 RNU4-66P-201ENST00000365199 138 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 MIR9-2-201ENST00000384838 87 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AL117351.1-201ENST00000438864 766 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 RNU7-188P-201ENST00000517063 64 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 MIR3179-1-201ENST00000578940 84 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 MIR3179-2-201ENST00000579107 84 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 MIR3179-3-201ENST00000579566 84 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AC091965.4-201ENST00000607691 587 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 MIR8055-201ENST00000610739 97 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 MIR3179-4-201ENST00000617599 84 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AC126544.2-201ENST00000625174 749 ntBASIC-1.52□□□□□ -2.65
UBR3Q6ZT12 AL596211.1-201ENST00000569873 2277 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 RNU6-324P-201ENST00000363957 106 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 RNU6-901P-201ENST00000384593 106 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 MIR558-201ENST00000384920 94 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 AC137499.1-201ENST00000427602 88 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 SNORA25.14-201ENST00000516481 132 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 RNU6-201P-201ENST00000517100 61 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 MIR4491-201ENST00000581087 68 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 MIR6082-201ENST00000613604 109 ntBASIC-1.53□□□□□ -2.65
UBR3Q6ZT12 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 SNORD115-8-201ENST00000363856 82 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 SNORD115-38-201ENST00000365037 82 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 SNORA20B-201ENST00000384220 132 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 MTND4P3-201ENST00000417829 541 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 AL512286.1-201ENST00000439244 400 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RPL39P25-201ENST00000449384 154 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 SNORD38.3-201ENST00000516599 73 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RNU6-685P-201ENST00000517088 95 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 AL445984.1-201ENST00000637834 659 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 MIR30D-201ENST00000362283 70 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 SNORA1.2-201ENST00000365189 134 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 SNORA24-201ENST00000384096 131 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RNU6-131P-201ENST00000391144 107 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RNU4-83P-201ENST00000410863 133 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RNU6-387P-201ENST00000411331 105 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 AL354751.2-201ENST00000415471 210 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 HMGN2P32-201ENST00000444648 269 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RNU6-983P-201ENST00000516004 103 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 MIR3118-1-201ENST00000581787 76 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 AL356055.1-201ENST00000602528 446 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RNU6-86P-201ENST00000606534 107 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 MIR8066-201ENST00000617280 78 ntBASIC-1.54□□□□□ -2.66
UBR3Q6ZT12 RNU6-403P-201ENST00000363163 104 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 SNORD56.2-201ENST00000363242 71 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 AL158053.1-201ENST00000441503 453 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 AC018710.1-201ENST00000506509 158 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 AC131281.1-201ENST00000522984 164 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 MTND1P35-201ENST00000526739 508 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 uc_338.10-201ENST00000621872 182 ntBASIC-1.55□□□□□ -2.66
UBR3Q6ZT12 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 RNU6-540P-201ENST00000384622 101 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 USP9YP12-201ENST00000450481 570 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 RNU6-765P-201ENST00000516916 99 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 RNU7-161P-201ENST00000517289 62 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 MTND4LP25-201ENST00000570218 163 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 MIR487A-201ENST00000385009 80 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 AL137792.2-201ENST00000443484 235 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 RNA5SP272-201ENST00000516095 111 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 AC245297.2-201ENST00000610119 565 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 AC023510.2-201ENST00000622162 746 ntBASIC-1.56□□□□□ -2.66
UBR3Q6ZT12 RNU6-136P-201ENST00000384663 107 ntBASIC-1.57□□□□□ -2.66
UBR3Q6ZT12 MTCYBP4-201ENST00000401524 249 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms