Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 Y_RNA.368-201ENST00000365547 113 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 SNORD14.1-201ENST00000365609 90 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 SNORD63-201ENST00000384262 68 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 RNU7-90P-201ENST00000459216 62 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 COX6CP14-201ENST00000469580 174 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 SNORA74.3-201ENST00000517108 154 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 POLR3GP1-201ENST00000594073 261 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 JPX_2.1-201ENST00000614161 69 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 AL008636.1-201ENST00000625038 1018 ntBASIC1.09□□□□□ -2.23
RPUSD3Q6P087 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
RPUSD3Q6P087 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.458-201ENST00000384240 102 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 MIR520C-201ENST00000385005 87 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 RPS29P29-201ENST00000456396 171 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 RNU6-475P-201ENST00000516073 104 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 RNU7-43P-201ENST00000516554 64 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.08□□□□□ -2.24
RPUSD3Q6P087 MIR2681-201ENST00000581814 105 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 AL078603.1-201ENST00000603824 313 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 PRELID3BP2-201ENST00000605362 201 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
RPUSD3Q6P087 AL391903.3-201ENST00000612158 163 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
RPUSD3Q6P087 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.172-201ENST00000363765 102 ntBASIC1.07□□□□□ -2.24
RPUSD3Q6P087 SNORD14E-201ENST00000364009 85 ntBASIC1.07□□□□□ -2.24
RPUSD3Q6P087 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
RPUSD3Q6P087 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
RPUSD3Q6P087 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
RPUSD3Q6P087 SNORA25.10-201ENST00000515926 124 ntBASIC1.07□□□□□ -2.24
RPUSD3Q6P087 RNU4-77P-201ENST00000516692 156 ntBASIC1.07□□□□□ -2.24
RPUSD3Q6P087 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
RPUSD3Q6P087 AL096861.1-201ENST00000610899 123 ntBASIC1.07□□□□□ -2.24
RPUSD3Q6P087 RNA5SP48-201ENST00000363969 126 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.303-201ENST00000364998 94 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.310-201ENST00000365063 113 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.551-201ENST00000384661 102 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 MIR802-201ENST00000390235 94 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.06□□□□□ -2.24
RPUSD3Q6P087 RNU7-21P-201ENST00000459430 62 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 MTND3P22-201ENST00000510932 243 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 AP003357.1-201ENST00000604497 148 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.06□□□□□ -2.24
RPUSD3Q6P087 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.06□□□□□ -2.24
RPUSD3Q6P087 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
RPUSD3Q6P087 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.471-201ENST00000384312 102 ntBASIC1.05□□□□□ -2.24
RPUSD3Q6P087 SNORD38C-201ENST00000384381 69 ntBASIC1.05□□□□□ -2.24
RPUSD3Q6P087 MIR516B2-201ENST00000385190 85 ntBASIC1.05□□□□□ -2.24
RPUSD3Q6P087 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
RPUSD3Q6P087 RNU6-1170P-201ENST00000515974 106 ntBASIC1.05□□□□□ -2.24
RPUSD3Q6P087 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
RPUSD3Q6P087 AL050343.2-201ENST00000607338 280 ntBASIC1.05□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.203-201ENST00000364106 102 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 RNY3-201ENST00000365484 102 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.431-201ENST00000384086 102 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.496-201ENST00000384444 101 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 RNU6-1067P-201ENST00000384752 107 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 AC022028.1-201ENST00000412054 408 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 AF228730.4-201ENST00000421457 183 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 FABP5P4-201ENST00000437203 171 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 RPL23AP54-201ENST00000495129 419 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
RPUSD3Q6P087 SEPT14P8-201ENST00000508026 178 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 RNU6-966P-201ENST00000516479 104 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 AC090142.3-201ENST00000519012 385 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 AC006157.1-201ENST00000611750 366 ntBASIC1.04□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.5-201ENST00000362334 102 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 RNA5SP264-201ENST00000363115 107 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.197-201ENST00000364004 102 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 Y_RNA.363-201ENST00000365529 113 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 MIR942-201ENST00000401111 86 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 HMGN1P10-201ENST00000474557 553 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 PDCD5P2-201ENST00000507570 312 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 SNORA18.7-201ENST00000516910 131 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 DEFB117-201ENST00000602356 141 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 AL080274.1-201ENST00000605565 220 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 SNORD113-5-201ENST00000607261 78 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 AC104985.2-201ENST00000620598 500 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 MIR6734-201ENST00000621166 68 ntBASIC1.03□□□□□ -2.24
RPUSD3Q6P087 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RPUSD3Q6P087 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.03□□□□□ -2.24
RPUSD3Q6P087 MIR103A2-201ENST00000362154 78 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 SNORD50B-201ENST00000364995 70 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 RNU1-36P-201ENST00000365130 165 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 RNU6-442P-201ENST00000383968 104 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.424-201ENST00000384063 103 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 MIR520E-201ENST00000384867 87 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 POLR2KP2-201ENST00000438155 177 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 RNU7-115P-201ENST00000516433 55 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 RNU6-113P-201ENST00000516653 101 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 AC024405.2-202ENST00000532731 184 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 AC093027.1-201ENST00000546698 429 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 AC127455.1-201ENST00000565496 145 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 MIR4764-201ENST00000580680 88 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 MIR3192-201ENST00000584920 77 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 MIR548AY-201ENST00000617669 107 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms