Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORA71B-202ENST00000439232 272 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.01□□□□□ -1.77
VARS2Q5ST30 AC104619.4-201ENST00000510773 249 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 RPL23AP94-201ENST00000512518 302 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 PHBP14-201ENST00000512887 367 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC4.01□□□□□ -1.77
VARS2Q5ST30 MIR4765-201ENST00000585007 77 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 AL512598.1-201ENST00000610158 273 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 MIR3651-201ENST00000630427 90 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VARS2Q5ST30 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4□□□□□ -1.77
VARS2Q5ST30 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VARS2Q5ST30 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
VARS2Q5ST30 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4□□□□□ -1.77
VARS2Q5ST30 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VARS2Q5ST30 SNORA8-201ENST00000384574 139 ntBASIC4□□□□□ -1.77
VARS2Q5ST30 RNA5SP323-201ENST00000391094 133 ntBASIC4□□□□□ -1.77
VARS2Q5ST30 SNORA70.14-201ENST00000516205 110 ntBASIC4□□□□□ -1.77
VARS2Q5ST30 RNU6-1041P-201ENST00000516254 102 ntBASIC4□□□□□ -1.77
VARS2Q5ST30 SNORD67.1-201ENST00000516618 108 ntBASIC4□□□□□ -1.77
VARS2Q5ST30 AP000867.2-201ENST00000532468 320 ntBASIC4□□□□□ -1.77
VARS2Q5ST30 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
VARS2Q5ST30 MIR3922-201ENST00000585192 84 ntBASIC4□□□□□ -1.77
VARS2Q5ST30 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4□□□□□ -1.77
VARS2Q5ST30 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4□□□□□ -1.77
VARS2Q5ST30 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.99□□□□□ -1.77
VARS2Q5ST30 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
VARS2Q5ST30 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VARS2Q5ST30 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VARS2Q5ST30 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VARS2Q5ST30 IPO8P1-201ENST00000455509 3109 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNA5SP189-201ENST00000364920 115 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 Y_RNA.500-201ENST00000384466 111 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 SNORA48.2-201ENST00000390926 124 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-447P-201ENST00000410293 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-1118P-201ENST00000410382 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-1076P-201ENST00000410397 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-355P-201ENST00000410427 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-791P-201ENST00000410467 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-705P-201ENST00000410601 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-1100P-201ENST00000410691 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-860P-201ENST00000410860 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-1217P-201ENST00000411276 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-785P-201ENST00000411324 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 BX510359.1-201ENST00000456973 237 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNA5SP208-201ENST00000516156 78 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 RNU6-958P-201ENST00000516995 106 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 AL020996.3-201ENST00000606617 222 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 U6.90-201ENST00000614007 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 MIR6076-201ENST00000617521 113 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 U6.70-201ENST00000620287 104 ntBASIC3.99□□□□□ -1.77
VARS2Q5ST30 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VARS2Q5ST30 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VARS2Q5ST30 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
VARS2Q5ST30 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.98□□□□□ -1.77
VARS2Q5ST30 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VARS2Q5ST30 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.98□□□□□ -1.77
VARS2Q5ST30 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VARS2Q5ST30 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VARS2Q5ST30 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
VARS2Q5ST30 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VARS2Q5ST30 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VARS2Q5ST30 AL138878.1-201ENST00000405131 347 ntBASIC3.98□□□□□ -1.77
VARS2Q5ST30 TRIAP1P1-201ENST00000427062 225 ntBASIC3.98□□□□□ -1.77
VARS2Q5ST30 RNA5SP309-201ENST00000516670 106 ntBASIC3.98□□□□□ -1.77
VARS2Q5ST30 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.98□□□□□ -1.77
VARS2Q5ST30 AL137849.1-201ENST00000604767 169 ntBASIC3.98□□□□□ -1.77
VARS2Q5ST30 MIR4791-201ENST00000607666 84 ntBASIC3.98□□□□□ -1.77
VARS2Q5ST30 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
VARS2Q5ST30 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VARS2Q5ST30 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VARS2Q5ST30 CEP170P1-201ENST00000502249 4587 ntBASIC3.97□□□□□ -1.77
VARS2Q5ST30 ATP5A1P2-201ENST00000412323 255 ntBASIC3.97□□□□□ -1.77
VARS2Q5ST30 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.97□□□□□ -1.77
VARS2Q5ST30 AC009969.1-201ENST00000438726 172 ntBASIC3.97□□□□□ -1.77
VARS2Q5ST30 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.97□□□□□ -1.77
VARS2Q5ST30 RNU7-48P-201ENST00000458875 63 ntBASIC3.97□□□□□ -1.77
VARS2Q5ST30 RNU7-28P-201ENST00000516759 62 ntBASIC3.97□□□□□ -1.77
VARS2Q5ST30 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
VARS2Q5ST30 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VARS2Q5ST30 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VARS2Q5ST30 MFSD8-233ENST00000641482 4860 ntBASIC3.97□□□□□ -1.77
VARS2Q5ST30 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VARS2Q5ST30 AF117829.1-206ENST00000621883 3802 ntBASIC3.97□□□□□ -1.77
VARS2Q5ST30 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
VARS2Q5ST30 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VARS2Q5ST30 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VARS2Q5ST30 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
VARS2Q5ST30 Y_RNA.98-201ENST00000363109 102 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 SNORA25.4-201ENST00000363666 124 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 RNU6-546P-201ENST00000383991 107 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 SNORA24-201ENST00000384096 131 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 MIR633-201ENST00000384821 98 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 RNA5SP424-201ENST00000390988 115 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 RNU6-630P-201ENST00000391258 106 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 AC015922.2-201ENST00000435593 184 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 AC024995.1-201ENST00000523014 93 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 AL627230.6-201ENST00000611129 280 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 MIR8066-201ENST00000617280 78 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms