Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-113P-201ENST00000516653 101 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 AC022616.4-201ENST00000522985 181 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 AP003716.2-201ENST00000528260 108 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 MIR3145-201ENST00000580727 82 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 AL606534.2-204ENST00000635008 178 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 AL442644.1-201ENST00000454390 3105 ntBASIC0.73□□□□□ -2.29
RFX4Q33E94 Y_RNA.331-201ENST00000365267 102 ntBASIC0.73□□□□□ -2.29
RFX4Q33E94 RNU6-1009P-201ENST00000390996 107 ntBASIC0.73□□□□□ -2.29
RFX4Q33E94 RNU7-41P-201ENST00000515917 61 ntBASIC0.73□□□□□ -2.29
RFX4Q33E94 SNORA74.3-201ENST00000517108 154 ntBASIC0.73□□□□□ -2.29
RFX4Q33E94 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
RFX4Q33E94 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
RFX4Q33E94 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 RNU1-115P-201ENST00000365329 160 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 Y_RNA.368-201ENST00000365547 113 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 RNU6-1323P-201ENST00000384025 107 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 Y_RNA.462-201ENST00000384268 102 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 RNU6-937P-201ENST00000384325 106 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 RNY1P14-201ENST00000384426 108 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 RNU4-30P-201ENST00000410245 143 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 RNU6-130P-201ENST00000411112 103 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 AL160004.2-201ENST00000432935 350 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 MTND5P20-201ENST00000448677 143 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 RNA5SP102-201ENST00000516865 106 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 MIR548S-201ENST00000581352 82 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 MIR4801-201ENST00000582704 82 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 PART1_1.1-201ENST00000611761 217 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
RFX4Q33E94 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
RFX4Q33E94 Y_RNA.4-201ENST00000362333 112 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 Y_RNA.39-201ENST00000362620 98 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 SNORA25.3-201ENST00000363205 127 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 Y_RNA.164-201ENST00000363709 102 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 Y_RNA.813-201ENST00000364639 102 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 Y_RNA.341-201ENST00000365341 102 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 Y_RNA.579-201ENST00000390939 94 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 MIR1185-1-201ENST00000408598 86 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
RFX4Q33E94 U8.19-201ENST00000459095 133 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 RNU6-976P-201ENST00000516086 111 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 SNORA40.14-201ENST00000516543 86 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 Y_RNA.702-201ENST00000516843 96 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 AC024405.2-202ENST00000532731 184 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 AL121655.1-201ENST00000605811 308 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 Y_RNA.772-201ENST00000606692 102 ntBASIC0.71□□□□□ -2.3
RFX4Q33E94 RNU6-1084P-201ENST00000362498 107 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 RNA5SP264-201ENST00000363115 107 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 Y_RNA.286-201ENST00000364813 102 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 U8.7-201ENST00000364940 136 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 SNORD114-24-201ENST00000365029 72 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 Y_RNA.456-201ENST00000384232 111 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 Y_RNA.551-201ENST00000384661 102 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 MIR136-201ENST00000385207 82 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 RNU6-131P-201ENST00000391144 107 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 RNU6-710P-201ENST00000410424 105 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.7□□□□□ -2.3
RFX4Q33E94 AC117454.1-201ENST00000491120 168 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.7□□□□□ -2.3
RFX4Q33E94 RNU7-110P-201ENST00000516891 62 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 MIR3973-201ENST00000579824 107 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 MIR4795-201ENST00000584182 89 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 POLR3GP1-201ENST00000594073 261 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 AP003357.1-201ENST00000604497 148 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 AC011373.1-201ENST00000607270 237 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.7□□□□□ -2.3
RFX4Q33E94 RNU4-73P-201ENST00000363164 141 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 Y_RNA.143-201ENST00000363520 106 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 snoU2-30.1-201ENST00000365012 70 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 SNORD63-201ENST00000384262 68 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 MIR520C-201ENST00000385005 87 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 AC236972.2-201ENST00000434979 310 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 RNU7-90P-201ENST00000459216 62 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 HMGN1P10-201ENST00000474557 553 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 NDUFA4P2-201ENST00000489989 244 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 MTND3P22-201ENST00000510932 243 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 RN7SKP164-201ENST00000516138 266 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 RNU7-115P-201ENST00000516433 55 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.69□□□□□ -2.3
RFX4Q33E94 MIR4764-201ENST00000580680 88 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.69□□□□□ -2.3
RFX4Q33E94 RPS29P30-201ENST00000600975 111 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 AC007485.1-201ENST00000616755 206 ntBASIC0.69□□□□□ -2.3
RFX4Q33E94 Y_RNA.197-201ENST00000364004 102 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 RNU6-1048P-201ENST00000364054 107 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 Y_RNA.203-201ENST00000364106 102 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 SNORA25.9-201ENST00000365087 128 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 SNORD14.1-201ENST00000365609 90 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 Y_RNA.439-201ENST00000384119 94 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 MIR15B-201ENST00000385045 98 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 RNU2-14P-201ENST00000411053 191 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 SNRPGP14-201ENST00000435400 219 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms