Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 snoU18.1-201ENST00000629629 71 ntBASIC1.94□□□□□ -2.1
ZNF543Q08ER8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.203-201ENST00000364106 102 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 RNU6-740P-201ENST00000364734 105 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.478-201ENST00000384358 107 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.562-201ENST00000384695 113 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.590-201ENST00000410140 107 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF543Q08ER8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF543Q08ER8 HMGN1P7-201ENST00000491722 313 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 OR9P1P-201ENST00000496431 281 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 AL513423.1-201ENST00000621695 132 ntBASIC1.93□□□□□ -2.1
ZNF543Q08ER8 MIR424-201ENST00000362227 98 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 RNU6-674P-201ENST00000363831 107 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 RNU6-457P-201ENST00000363999 107 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 RNU4-41P-201ENST00000364426 143 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.350-201ENST00000365409 98 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 RNU4-52P-201ENST00000384209 138 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 AL603825.1-201ENST00000438481 80 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.679-201ENST00000516416 91 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 AC005357.1-201ENST00000588399 301 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 BX284668.6-201ENST00000606899 438 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 JPX_2.1-201ENST00000614161 69 ntBASIC1.92□□□□□ -2.1
ZNF543Q08ER8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.92□□□□□ -2.1
ZNF543Q08ER8 MIR126-201ENST00000362291 85 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.54-201ENST00000362766 105 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.82-201ENST00000363000 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.92-201ENST00000363043 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 SNORD68-201ENST00000363214 84 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.235-201ENST00000364412 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.306-201ENST00000365015 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.312-201ENST00000365089 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.322-201ENST00000365151 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.416-201ENST00000384014 113 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 RNU6-203P-201ENST00000384038 104 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 AL603910.2-201ENST00000407268 136 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 AC004965.1-201ENST00000413033 213 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.650-201ENST00000459002 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 AC099513.1-201ENST00000490423 301 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.777-201ENST00000516982 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.771-201ENST00000598668 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 AL591926.4-201ENST00000616895 298 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.789-201ENST00000622480 102 ntBASIC1.91□□□□□ -2.1
ZNF543Q08ER8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
ZNF543Q08ER8 Y_RNA.253-201ENST00000364562 112 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 Y_RNA.293-201ENST00000364908 93 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 RNU6-211P-201ENST00000384047 107 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 HMGN2P38-201ENST00000423806 265 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 Z98949.2-201ENST00000440996 144 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.9□□□□□ -2.11
ZNF543Q08ER8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.9□□□□□ -2.11
ZNF543Q08ER8 RNU6-1007P-201ENST00000516586 107 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.9□□□□□ -2.11
ZNF543Q08ER8 AC024614.2-201ENST00000577584 372 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 SNORD3E-202ENST00000627253 216 ntBASIC1.9□□□□□ -2.11
ZNF543Q08ER8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
ZNF543Q08ER8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
ZNF543Q08ER8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ZNF543Q08ER8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ZNF543Q08ER8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ZNF543Q08ER8 Y_RNA.117-201ENST00000363294 101 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 U8.5-201ENST00000364528 136 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 RNU6-574P-201ENST00000384265 107 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 RNU6-424P-201ENST00000384367 105 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 MIR194-1-201ENST00000384892 85 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 AL161935.2-201ENST00000414627 60 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 SNRPGP10-201ENST00000432323 225 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 Y_RNA.638-201ENST00000459374 113 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 RNA5SP168-201ENST00000516642 112 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
ZNF543Q08ER8 MIR5688-201ENST00000580619 83 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.89□□□□□ -2.11
ZNF543Q08ER8 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 AL008718.3-201ENST00000610217 321 ntBASIC1.89□□□□□ -2.11
ZNF543Q08ER8 MIR367-201ENST00000362299 68 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 Y_RNA.277-201ENST00000364754 102 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 Y_RNA.401-201ENST00000383965 117 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 MIR660-201ENST00000385235 97 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 SNORA12.1-201ENST00000390873 148 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 SNORA67.5-201ENST00000391036 107 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 RNU6-131P-201ENST00000391144 107 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 Y_RNA.618-201ENST00000410949 107 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 MLLT10P1-201ENST00000418346 262 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 AC108667.1-201ENST00000428618 249 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 MIR4724-201ENST00000579485 89 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 MIR4762-201ENST00000585261 75 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 ICE2P2-201ENST00000483823 2787 ntBASIC1.88□□□□□ -2.11
ZNF543Q08ER8 CALM2P4-201ENST00000430810 426 ntBASIC1.87□□□□□ -2.11
ZNF543Q08ER8 AC023449.1-201ENST00000454464 154 ntBASIC1.87□□□□□ -2.11
ZNF543Q08ER8 SNORD2.1-201ENST00000458762 69 ntBASIC1.87□□□□□ -2.11
ZNF543Q08ER8 CYCTP-201ENST00000504253 315 ntBASIC1.87□□□□□ -2.11
ZNF543Q08ER8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms