Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-533P-201ENST00000384144 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR562-201ENST00000384894 95 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORA49-201ENST00000386157 136 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR454-201ENST00000390180 115 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORD70.1-201ENST00000391007 85 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR873-201ENST00000401120 77 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MRPL42P2-201ENST00000403169 426 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 USMG5P1-201ENST00000425964 177 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 MTCO3P8-201ENST00000453691 755 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-437P-201ENST00000459408 95 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RPL23AP75-201ENST00000491601 451 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC022784.5-201ENST00000522241 437 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MTND4LP18-201ENST00000526864 291 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 HIF1AP1-201ENST00000553642 175 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AL157687.1-201ENST00000554853 619 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR5583-1-201ENST00000580941 59 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR4263-201ENST00000584745 83 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR4999-201ENST00000585029 91 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC069431.2-201ENST00000604149 1099 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AP000942.4-201ENST00000604811 241 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AL450270.1-201ENST00000606160 391 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AL590491.3-201ENST00000610731 82 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 U6.73-201ENST00000619194 103 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC092794.2-201ENST00000620933 563 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC005609.4-201ENST00000625071 447 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC007671.2-201ENST00000637344 619 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-792P-201ENST00000363490 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 SNORD115-30-201ENST00000364117 82 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-116P-201ENST00000384042 109 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-767P-201ENST00000384132 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR521-1-201ENST00000384902 87 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR452-201ENST00000385020 85 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR136-201ENST00000385207 82 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR644A-201ENST00000385262 94 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR1278-201ENST00000408753 81 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.15□□□□□ -2.43
COL7A1Q02388 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.15□□□□□ -2.43
COL7A1Q02388 AC069271.1-201ENST00000445577 156 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MTND2P30-201ENST00000456663 382 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 snoU13.16-201ENST00000459350 104 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.15□□□□□ -2.43
COL7A1Q02388 SNORA19.2-201ENST00000516013 114 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-732P-201ENST00000516033 103 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-693P-201ENST00000516134 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU7-172P-201ENST00000517125 64 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU7-161P-201ENST00000517289 62 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AP003733.2-201ENST00000529409 171 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AC245505.1-201ENST00000556398 224 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AC104072.1-201ENST00000568817 668 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RBM11P1-201ENST00000604951 799 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AC006157.1-201ENST00000611750 366 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR6082-201ENST00000613604 109 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AL391262.2-201ENST00000622466 494 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AL078596.1-201ENST00000624856 447 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR6863-201ENST00000636112 90 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AC099654.12-201ENST00000639868 649 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-428P-201ENST00000362942 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU4-80P-201ENST00000363200 141 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-266P-201ENST00000364225 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 U8.6-201ENST00000364939 135 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-702P-201ENST00000364982 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-883P-201ENST00000384597 107 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
COL7A1Q02388 PCNPP3-201ENST00000393579 471 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MIR208B-201ENST00000401172 77 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU2-14P-201ENST00000411053 191 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-195P-201ENST00000411352 109 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 SNRPGP10-201ENST00000432323 225 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 MTCO2P16-201ENST00000436962 677 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RPL22P17-201ENST00000438729 315 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.15□□□□□ -2.43
COL7A1Q02388 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU7-129P-201ENST00000516128 62 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 SNORA19.3-201ENST00000516165 130 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 RNU6-911P-201ENST00000516523 104 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.15□□□□□ -2.43
COL7A1Q02388 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL7A1Q02388 PIGPP4-201ENST00000584447 307 ntBASIC-0.15□□□□□ -2.43
COL7A1Q02388 AC018714.1-201ENST00000605028 208 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms