Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNORD58B-201ENST00000607313 66 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 AL391903.3-201ENST00000612158 163 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 AC010205.1-201ENST00000616668 449 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.73□□□□□ -2.29
HMGCS1Q01581 RNU6-1084P-201ENST00000362498 107 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 Y_RNA.70-201ENST00000362886 110 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 SNORD50B-201ENST00000364995 70 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 Y_RNA.331-201ENST00000365267 102 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 SNORA72-201ENST00000384339 132 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 SNORA80D-201ENST00000384488 135 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 MIR1287-201ENST00000408492 90 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC005042.3-201ENST00000453230 174 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC245047.8-201ENST00000456455 284 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 RNU7-21P-201ENST00000459430 62 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 RPS29P1-201ENST00000465274 159 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC010655.3-201ENST00000478818 450 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC022616.4-201ENST00000522985 181 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 RBM11P1-201ENST00000604951 799 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC108706.1-201ENST00000611053 297 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HMGCS1Q01581 SNORA25.3-201ENST00000363205 127 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 Y_RNA.263-201ENST00000364659 114 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 Y_RNA.310-201ENST00000365063 113 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 Y_RNA.315-201ENST00000365117 102 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 Y_RNA.341-201ENST00000365341 102 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 RNU6-1009P-201ENST00000390996 107 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 RNU4-30P-201ENST00000410245 143 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 SNRPGP10-201ENST00000432323 225 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 AL160004.2-201ENST00000432935 350 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGCS1Q01581 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGCS1Q01581 RNU7-41P-201ENST00000515917 61 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGCS1Q01581 MIR3145-201ENST00000580727 82 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 Y_RNA.224-201ENST00000364308 111 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 Y_RNA.252-201ENST00000364556 101 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 SNORD114-24-201ENST00000365029 72 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 AC117470.1-201ENST00000381974 330 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNU6-937P-201ENST00000384325 106 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 MIR136-201ENST00000385207 82 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNU6-131P-201ENST00000391144 107 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNA5SP247-201ENST00000411181 105 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNU7-110P-201ENST00000516891 62 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 SNORA74.3-201ENST00000517108 154 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 POLR3GP1-201ENST00000594073 261 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 Y_RNA.772-201ENST00000606692 102 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 AL606534.2-204ENST00000635008 178 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.39-201ENST00000362620 98 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RNA5SP264-201ENST00000363115 107 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.143-201ENST00000363520 106 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 U8.7-201ENST00000364940 136 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.368-201ENST00000365547 113 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RNU6-1323P-201ENST00000384025 107 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.462-201ENST00000384268 102 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RNY3P14-201ENST00000384309 102 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.579-201ENST00000390939 94 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RNU6-710P-201ENST00000410424 105 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 MTND5P20-201ENST00000448677 143 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 MIR548S-201ENST00000581352 82 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RPS29P30-201ENST00000600975 111 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 AC011373.1-201ENST00000607270 237 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
HMGCS1Q01581 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.69□□□□□ -2.3
HMGCS1Q01581 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.813-201ENST00000364639 102 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 snoU2-30.1-201ENST00000365012 70 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNU1-115P-201ENST00000365329 160 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNY1P14-201ENST00000384426 108 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 MIR520C-201ENST00000385005 87 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 AC236972.2-201ENST00000434979 310 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNU7-90P-201ENST00000459216 62 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 SNORA40.14-201ENST00000516543 86 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 Y_RNA.702-201ENST00000516843 96 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 AP003716.2-201ENST00000528260 108 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 AC024405.2-202ENST00000532731 184 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 MIR4764-201ENST00000580680 88 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 MIR4801-201ENST00000582704 82 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 AL121655.1-201ENST00000605811 308 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNU4-73P-201ENST00000363164 141 ntBASIC0.67□□□□□ -2.3
HMGCS1Q01581 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
HMGCS1Q01581 Y_RNA.456-201ENST00000384232 111 ntBASIC0.67□□□□□ -2.3
HMGCS1Q01581 Y_RNA.551-201ENST00000384661 102 ntBASIC0.67□□□□□ -2.3
HMGCS1Q01581 MIR942-201ENST00000401111 86 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms