Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU4-28P-201ENST00000364739 141 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 RNU6-128P-201ENST00000383976 107 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 MIR517A-201ENST00000385001 87 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 MIR196A2-201ENST00000385189 110 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 RNA5SP300-201ENST00000391197 107 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 MCFD2P1-201ENST00000417812 300 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 SNRPGP14-201ENST00000435400 219 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 RNU7-125P-201ENST00000458760 62 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 SNORD126-201ENST00000459475 77 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 AC006380.1-201ENST00000603598 186 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 RNU1-29P-201ENST00000606574 126 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 AC006157.1-201ENST00000611750 366 ntBASIC-0.61□□□□□ -2.51
H3F3AP84243 SNORA1.2-201ENST00000365189 134 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 RNU4-20P-201ENST00000365601 151 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 MIR518F-201ENST00000384973 87 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 MIR501-201ENST00000390204 84 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 RNU6-847P-201ENST00000411115 108 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 RNU6-625P-201ENST00000459412 107 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.62□□□□□ -2.51
H3F3AP84243 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 RNU6-232P-201ENST00000517144 64 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 MIR5696-201ENST00000578474 85 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 MIR3152-201ENST00000579801 74 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 AL442067.1-201ENST00000613261 223 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 AC022306.2-201ENST00000617563 647 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 uc_338.22-201ENST00000622722 187 ntBASIC-0.62□□□□□ -2.51
H3F3AP84243 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.63□□□□□ -2.51
H3F3AP84243 MTATP6P13-201ENST00000438531 667 ntBASIC-0.63□□□□□ -2.51
H3F3AP84243 AL031667.1-201ENST00000440222 725 ntBASIC-0.63□□□□□ -2.51
H3F3AP84243 U8.19-201ENST00000459095 133 ntBASIC-0.63□□□□□ -2.51
H3F3AP84243 U8.22-201ENST00000459141 133 ntBASIC-0.63□□□□□ -2.51
H3F3AP84243 RNU2-60P-201ENST00000517290 128 ntBASIC-0.63□□□□□ -2.51
H3F3AP84243 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.63□□□□□ -2.51
H3F3AP84243 MIR3666-201ENST00000607845 111 ntBASIC-0.63□□□□□ -2.51
H3F3AP84243 AC091304.10-201ENST00000641554 121 ntBASIC-0.63□□□□□ -2.51
H3F3AP84243 RNU6-553P-201ENST00000364047 96 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 RNU6-46P-201ENST00000383860 107 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 RNU6-442P-201ENST00000383968 104 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 MIR1912-201ENST00000410389 80 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.64□□□□□ -2.51
H3F3AP84243 MTND1P17-201ENST00000448961 204 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 MTND1P27-201ENST00000451117 902 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.64□□□□□ -2.51
H3F3AP84243 RNU6-180P-201ENST00000516697 61 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 RNU6-759P-201ENST00000516740 103 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.64□□□□□ -2.51
H3F3AP84243 AC092954.2-201ENST00000609103 430 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 MIR6514-201ENST00000622549 70 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 MIR4788-201ENST00000639104 80 ntBASIC-0.64□□□□□ -2.51
H3F3AP84243 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 RNU6-324P-201ENST00000363957 106 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 RNU6-95P-201ENST00000384697 107 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 MIR588-201ENST00000384900 83 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 MTND2P18-201ENST00000419962 1030 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 MTCO1P5-201ENST00000433573 344 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 POLR2KP2-201ENST00000438155 177 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.65□□□□□ -2.51
H3F3AP84243 RNA5SP47-201ENST00000517230 109 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 AC060788.1-201ENST00000521318 469 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.65□□□□□ -2.51
H3F3AP84243 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.65□□□□□ -2.51
H3F3AP84243 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 RNU6-480P-201ENST00000384332 107 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 SNORA8.3-201ENST00000384679 139 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 AL353193.1-201ENST00000421444 268 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 MTND1P11-201ENST00000456661 876 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 SNORD11.1-201ENST00000459482 85 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 AC083904.1-201ENST00000487828 231 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 SNORA31.14-201ENST00000516728 116 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 MTCO2P4-201ENST00000517968 247 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 AC105029.1-201ENST00000520250 669 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 MIR3925-201ENST00000584674 77 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 AP001180.6-201ENST00000584918 159 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 AC121247.2-201ENST00000604776 136 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 AC019193.3-201ENST00000609144 554 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 AC079248.2-201ENST00000623779 326 ntBASIC-0.66□□□□□ -2.52
H3F3AP84243 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.67□□□□□ -2.52
H3F3AP84243 SNORD115-30-201ENST00000364117 82 ntBASIC-0.67□□□□□ -2.52
H3F3AP84243 SNORD49B-201ENST00000365172 72 ntBASIC-0.67□□□□□ -2.52
H3F3AP84243 SNORD14C-201ENST00000365382 88 ntBASIC-0.67□□□□□ -2.52
H3F3AP84243 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
H3F3AP84243 EIF1P2-201ENST00000428233 350 ntBASIC-0.67□□□□□ -2.52
H3F3AP84243 snoU13.16-201ENST00000459350 104 ntBASIC-0.67□□□□□ -2.52
H3F3AP84243 AC007494.3-201ENST00000624660 743 ntBASIC-0.67□□□□□ -2.52
H3F3AP84243 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 SNORA72.3-201ENST00000365074 132 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 SNORA72-201ENST00000384339 132 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 SNORD38B-201ENST00000384690 67 ntBASIC-0.68□□□□□ -2.52
H3F3AP84243 MTCO2P19-201ENST00000427513 598 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms