Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
CBX1P83916 SNORD38C-201ENST00000384381 69 ntBASIC0.51□□□□□ -2.33
CBX1P83916 SNORA2B-201ENST00000384583 137 ntBASIC0.51□□□□□ -2.33
CBX1P83916 RNU6-310P-201ENST00000384655 107 ntBASIC0.51□□□□□ -2.33
CBX1P83916 MIR628-201ENST00000385229 95 ntBASIC0.51□□□□□ -2.33
CBX1P83916 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
CBX1P83916 MIR1302-7-201ENST00000408841 72 ntBASIC0.51□□□□□ -2.33
CBX1P83916 RNU6-855P-201ENST00000410395 104 ntBASIC0.51□□□□□ -2.33
CBX1P83916 AC244098.3-201ENST00000424803 96 ntBASIC0.51□□□□□ -2.33
CBX1P83916 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.51□□□□□ -2.33
CBX1P83916 MTND1P2-201ENST00000430604 821 ntBASIC0.51□□□□□ -2.33
CBX1P83916 RNU6-966P-201ENST00000516479 104 ntBASIC0.51□□□□□ -2.33
CBX1P83916 MIR4300-201ENST00000581016 96 ntBASIC0.51□□□□□ -2.33
CBX1P83916 MIR5690-201ENST00000583739 73 ntBASIC0.51□□□□□ -2.33
CBX1P83916 MIR151B-201ENST00000584249 96 ntBASIC0.51□□□□□ -2.33
CBX1P83916 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.51□□□□□ -2.33
CBX1P83916 RBM11P1-201ENST00000604951 799 ntBASIC0.51□□□□□ -2.33
CBX1P83916 AC022441.3-201ENST00000605737 136 ntBASIC0.51□□□□□ -2.33
CBX1P83916 AC007742.2-201ENST00000618226 398 ntBASIC0.51□□□□□ -2.33
CBX1P83916 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CBX1P83916 RNU6-845P-201ENST00000362578 103 ntBASIC0.5□□□□□ -2.33
CBX1P83916 RNU6-1188P-201ENST00000363795 107 ntBASIC0.5□□□□□ -2.33
CBX1P83916 Y_RNA.329-201ENST00000365209 107 ntBASIC0.5□□□□□ -2.33
CBX1P83916 RNU6-1323P-201ENST00000384025 107 ntBASIC0.5□□□□□ -2.33
CBX1P83916 MIR548J-201ENST00000408833 112 ntBASIC0.5□□□□□ -2.33
CBX1P83916 MCFD2P1-201ENST00000417812 300 ntBASIC0.5□□□□□ -2.33
CBX1P83916 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.5□□□□□ -2.33
CBX1P83916 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
CBX1P83916 MIR548AR-201ENST00000582191 57 ntBASIC0.5□□□□□ -2.33
CBX1P83916 AL355073.2-201ENST00000612106 557 ntBASIC0.5□□□□□ -2.33
CBX1P83916 MIR6788-201ENST00000618842 66 ntBASIC0.5□□□□□ -2.33
CBX1P83916 MIR6767-201ENST00000637302 66 ntBASIC0.5□□□□□ -2.33
CBX1P83916 Y_RNA.166-201ENST00000363730 102 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNY3P11-201ENST00000364153 102 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNU4-40P-201ENST00000364351 143 ntBASIC0.49□□□□□ -2.33
CBX1P83916 Y_RNA.370-201ENST00000365589 108 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNU6-890P-201ENST00000384121 107 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNU6-42P-201ENST00000384165 107 ntBASIC0.49□□□□□ -2.33
CBX1P83916 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
CBX1P83916 SNORD28B-201ENST00000390993 75 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNU6-613P-201ENST00000410412 108 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNA5SP222-201ENST00000411039 105 ntBASIC0.49□□□□□ -2.33
CBX1P83916 FCF1P9-201ENST00000412546 282 ntBASIC0.49□□□□□ -2.33
CBX1P83916 Y_RNA.655-201ENST00000515919 96 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNU6-470P-201ENST00000515954 104 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RNU7-116P-201ENST00000516940 62 ntBASIC0.49□□□□□ -2.33
CBX1P83916 RN7SKP295-201ENST00000517264 153 ntBASIC0.49□□□□□ -2.33
CBX1P83916 Z83818.1-201ENST00000603584 150 ntBASIC0.49□□□□□ -2.33
CBX1P83916 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.49□□□□□ -2.33
CBX1P83916 U2.1-201ENST00000618978 145 ntBASIC0.49□□□□□ -2.33
CBX1P83916 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
CBX1P83916 AC091925.1-201ENST00000623204 462 ntBASIC0.49□□□□□ -2.33
CBX1P83916 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
CBX1P83916 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CBX1P83916 MIR1-1-201ENST00000362147 71 ntBASIC0.48□□□□□ -2.33
CBX1P83916 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
CBX1P83916 AC244023.1-201ENST00000426884 112 ntBASIC0.48□□□□□ -2.33
CBX1P83916 RNU6-911P-201ENST00000516523 104 ntBASIC0.48□□□□□ -2.33
CBX1P83916 MIR2115-201ENST00000516657 100 ntBASIC0.48□□□□□ -2.33
CBX1P83916 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
CBX1P83916 AC087685.1-201ENST00000587507 141 ntBASIC0.48□□□□□ -2.33
CBX1P83916 AC242498.1-201ENST00000604134 111 ntBASIC0.48□□□□□ -2.33
CBX1P83916 JPX_2.1-201ENST00000614161 69 ntBASIC0.48□□□□□ -2.33
CBX1P83916 AC243994.1-201ENST00000618627 109 ntBASIC0.48□□□□□ -2.33
CBX1P83916 Y_RNA.160-201ENST00000363677 92 ntBASIC0.47□□□□□ -2.33
CBX1P83916 Y_RNA.203-201ENST00000364106 102 ntBASIC0.47□□□□□ -2.33
CBX1P83916 Y_RNA.314-201ENST00000365114 102 ntBASIC0.47□□□□□ -2.33
CBX1P83916 Y_RNA.341-201ENST00000365341 102 ntBASIC0.47□□□□□ -2.33
CBX1P83916 RNU6-442P-201ENST00000383968 104 ntBASIC0.47□□□□□ -2.33
CBX1P83916 MIR802-201ENST00000390235 94 ntBASIC0.47□□□□□ -2.33
CBX1P83916 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CBX1P83916 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.47□□□□□ -2.33
CBX1P83916 RNA5SP95-201ENST00000410319 137 ntBASIC0.47□□□□□ -2.33
CBX1P83916 RNA5SP247-201ENST00000411181 105 ntBASIC0.47□□□□□ -2.33
CBX1P83916 AL355375.2-201ENST00000574825 175 ntBASIC0.47□□□□□ -2.33
CBX1P83916 MIR5000-201ENST00000577717 103 ntBASIC0.47□□□□□ -2.33
CBX1P83916 POLR3GP1-201ENST00000594073 261 ntBASIC0.47□□□□□ -2.33
CBX1P83916 TPTEP1-208ENST00000636884 213 ntBASIC0.47□□□□□ -2.33
CBX1P83916 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
CBX1P83916 Y_RNA.279-201ENST00000364763 95 ntBASIC0.46□□□□□ -2.34
CBX1P83916 RNU6-1175P-201ENST00000365200 107 ntBASIC0.46□□□□□ -2.34
CBX1P83916 SNORA36.2-201ENST00000384004 127 ntBASIC0.46□□□□□ -2.34
CBX1P83916 Y_RNA.599-201ENST00000410489 109 ntBASIC0.46□□□□□ -2.34
CBX1P83916 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.46□□□□□ -2.34
CBX1P83916 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.46□□□□□ -2.34
CBX1P83916 AC005042.3-201ENST00000453230 174 ntBASIC0.46□□□□□ -2.34
CBX1P83916 AC012433.1-201ENST00000588916 398 ntBASIC0.46□□□□□ -2.34
CBX1P83916 AC104695.3-201ENST00000604052 296 ntBASIC0.46□□□□□ -2.34
CBX1P83916 U6.92-201ENST00000636464 89 ntBASIC0.46□□□□□ -2.34
CBX1P83916 Y_RNA.27-201ENST00000362540 103 ntBASIC0.45□□□□□ -2.34
CBX1P83916 Y_RNA.168-201ENST00000363740 102 ntBASIC0.45□□□□□ -2.34
CBX1P83916 Y_RNA.310-201ENST00000365063 113 ntBASIC0.45□□□□□ -2.34
CBX1P83916 RNU6-396P-201ENST00000365369 105 ntBASIC0.45□□□□□ -2.34
CBX1P83916 Y_RNA.456-201ENST00000384232 111 ntBASIC0.45□□□□□ -2.34
CBX1P83916 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
CBX1P83916 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.45□□□□□ -2.34
CBX1P83916 MIR1287-201ENST00000408492 90 ntBASIC0.45□□□□□ -2.34
CBX1P83916 PDCL2P1-201ENST00000419302 352 ntBASIC0.45□□□□□ -2.34
CBX1P83916 MTCO2P27-201ENST00000420740 428 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms