Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MTND1P27-201ENST00000451117 902 ntBASIC-0.64□□□□□ -2.51
HIST1H3AP68431 SNORD126-201ENST00000459475 77 ntBASIC-0.64□□□□□ -2.51
HIST1H3AP68431 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.64□□□□□ -2.51
HIST1H3AP68431 RNU6-504P-201ENST00000516568 104 ntBASIC-0.64□□□□□ -2.51
HIST1H3AP68431 RNU6-759P-201ENST00000516740 103 ntBASIC-0.64□□□□□ -2.51
HIST1H3AP68431 AC092954.2-201ENST00000609103 430 ntBASIC-0.64□□□□□ -2.51
HIST1H3AP68431 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.64□□□□□ -2.51
HIST1H3AP68431 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 RNU6-324P-201ENST00000363957 106 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 RNU6-652P-201ENST00000365488 107 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 RNU6-95P-201ENST00000384697 107 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 MIR625-201ENST00000385047 85 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 RNA5SP300-201ENST00000391197 107 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 RNU4-30P-201ENST00000410245 143 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 MCFD2P1-201ENST00000417812 300 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 MTND2P18-201ENST00000419962 1030 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 AC060788.1-201ENST00000521318 469 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.65□□□□□ -2.51
HIST1H3AP68431 MIR6828-201ENST00000636181 60 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 AC091304.10-201ENST00000641554 121 ntBASIC-0.65□□□□□ -2.51
HIST1H3AP68431 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 MIR7-2-201ENST00000384970 110 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 AL353193.1-201ENST00000421444 268 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 MTND1P11-201ENST00000456661 876 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 SNORD11.1-201ENST00000459482 85 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 AC083904.1-201ENST00000487828 231 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.66□□□□□ -2.52
HIST1H3AP68431 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 RNA5SP285-201ENST00000516619 119 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 MTCO2P4-201ENST00000517968 247 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 AC019193.3-201ENST00000609144 554 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 uc_338.22-201ENST00000622722 187 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 AC079248.2-201ENST00000623779 326 ntBASIC-0.66□□□□□ -2.52
HIST1H3AP68431 SNORD114-31-201ENST00000363219 75 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 SNORD114-28-201ENST00000363610 72 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 MIR588-201ENST00000384900 83 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
HIST1H3AP68431 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.67□□□□□ -2.52
HIST1H3AP68431 EIF1P2-201ENST00000428233 350 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 MTND1P17-201ENST00000448961 204 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 snoU13.16-201ENST00000459350 104 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 MIR3666-201ENST00000607845 111 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 AC007494.3-201ENST00000624660 743 ntBASIC-0.67□□□□□ -2.52
HIST1H3AP68431 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.68□□□□□ -2.52
HIST1H3AP68431 SNORA72.3-201ENST00000365074 132 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 SNORD14C-201ENST00000365382 88 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 SNORA72-201ENST00000384339 132 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 SNORD38B-201ENST00000384690 67 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 MTCO2P19-201ENST00000427513 598 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 AC236972.2-201ENST00000434979 310 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 POLR2KP2-201ENST00000438155 177 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 PRDX4P1-201ENST00000507189 574 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 RNU2-13P-201ENST00000515909 113 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 MIR4273-201ENST00000582824 84 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 AC006380.1-201ENST00000603598 186 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 AL355297.3-201ENST00000604082 446 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 AC124303.1-201ENST00000605703 360 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 AC109347.2-201ENST00000610220 349 ntBASIC-0.68□□□□□ -2.52
HIST1H3AP68431 RNU6-254P-201ENST00000363377 107 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 SNORD115-30-201ENST00000364117 82 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 RNU6-268P-201ENST00000364174 107 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 RNU6-879P-201ENST00000364328 108 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 RNU6-46P-201ENST00000383860 107 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 MT-TH-201ENST00000387441 69 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 SNRPGP14-201ENST00000435400 219 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 AL031667.1-201ENST00000440222 725 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 MTND3P16-201ENST00000452205 344 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.69□□□□□ -2.52
HIST1H3AP68431 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.69□□□□□ -2.52
HIST1H3AP68431 RNU6-180P-201ENST00000516697 61 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 AC040904.1-201ENST00000590850 223 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 AC134878.1-201ENST00000619901 243 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 AL391262.2-201ENST00000622466 494 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 MIR4788-201ENST00000639104 80 ntBASIC-0.69□□□□□ -2.52
HIST1H3AP68431 ZNF299P-201ENST00000406845 1804 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 RNU6-767P-201ENST00000384132 107 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 MIR3915-201ENST00000578518 97 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 MIR3152-201ENST00000579801 74 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.7□□□□□ -2.52
HIST1H3AP68431 AC087685.1-201ENST00000587507 141 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 RNU1-29P-201ENST00000606574 126 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 AL442067.1-201ENST00000613261 223 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 MIR548AZ-201ENST00000616567 95 ntBASIC-0.7□□□□□ -2.52
HIST1H3AP68431 RNY1P16-201ENST00000363063 111 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 RNU6-595P-201ENST00000363944 107 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.71□□□□□ -2.52
HIST1H3AP68431 RNU6-480P-201ENST00000384332 107 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms