Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Y_RNA.368-201ENST00000365547 113 ntBASIC0.51□□□□□ -2.33
VSX2P58304 SNORD14.1-201ENST00000365609 90 ntBASIC0.51□□□□□ -2.33
VSX2P58304 SNORD28B-201ENST00000390993 75 ntBASIC0.51□□□□□ -2.33
VSX2P58304 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
VSX2P58304 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.51□□□□□ -2.33
VSX2P58304 RNA5SP95-201ENST00000410319 137 ntBASIC0.51□□□□□ -2.33
VSX2P58304 PDCL2P1-201ENST00000419302 352 ntBASIC0.51□□□□□ -2.33
VSX2P58304 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
VSX2P58304 U7.7-201ENST00000459276 60 ntBASIC0.51□□□□□ -2.33
VSX2P58304 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
VSX2P58304 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.51□□□□□ -2.33
VSX2P58304 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.51□□□□□ -2.33
VSX2P58304 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
VSX2P58304 MIR4711-201ENST00000578274 70 ntBASIC0.51□□□□□ -2.33
VSX2P58304 MIR548AR-201ENST00000582191 57 ntBASIC0.51□□□□□ -2.33
VSX2P58304 AC006380.1-201ENST00000603598 186 ntBASIC0.51□□□□□ -2.33
VSX2P58304 AC005972.2-201ENST00000604690 348 ntBASIC0.51□□□□□ -2.33
VSX2P58304 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
VSX2P58304 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.51□□□□□ -2.33
VSX2P58304 Y_RNA.205-201ENST00000364128 113 ntBASIC0.5□□□□□ -2.33
VSX2P58304 Y_RNA.577-201ENST00000384794 101 ntBASIC0.5□□□□□ -2.33
VSX2P58304 RNA5SP193-201ENST00000410353 107 ntBASIC0.5□□□□□ -2.33
VSX2P58304 Y_RNA.599-201ENST00000410489 109 ntBASIC0.5□□□□□ -2.33
VSX2P58304 AC096644.2-201ENST00000429278 159 ntBASIC0.5□□□□□ -2.33
VSX2P58304 AL392103.1-201ENST00000447000 198 ntBASIC0.5□□□□□ -2.33
VSX2P58304 AC098869.1-201ENST00000481627 292 ntBASIC0.5□□□□□ -2.33
VSX2P58304 RNU6-155P-201ENST00000516347 100 ntBASIC0.5□□□□□ -2.33
VSX2P58304 AC005176.2-201ENST00000596933 147 ntBASIC0.5□□□□□ -2.33
VSX2P58304 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.5□□□□□ -2.33
VSX2P58304 MIR6516-201ENST00000630554 81 ntBASIC0.5□□□□□ -2.33
VSX2P58304 AC134026.1-201ENST00000623249 2239 ntBASIC0.5□□□□□ -2.33
VSX2P58304 RNU6-845P-201ENST00000362578 103 ntBASIC0.49□□□□□ -2.33
VSX2P58304 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
VSX2P58304 Y_RNA.146-201ENST00000363549 102 ntBASIC0.49□□□□□ -2.33
VSX2P58304 RNU6-1188P-201ENST00000363795 107 ntBASIC0.49□□□□□ -2.33
VSX2P58304 Y_RNA.329-201ENST00000365209 107 ntBASIC0.49□□□□□ -2.33
VSX2P58304 RNU6-767P-201ENST00000384132 107 ntBASIC0.49□□□□□ -2.33
VSX2P58304 MIR570-201ENST00000384917 97 ntBASIC0.49□□□□□ -2.33
VSX2P58304 SNORA75.6-201ENST00000391318 127 ntBASIC0.49□□□□□ -2.33
VSX2P58304 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
VSX2P58304 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.49□□□□□ -2.33
VSX2P58304 MTCO3P10-201ENST00000455912 772 ntBASIC0.49□□□□□ -2.33
VSX2P58304 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.49□□□□□ -2.33
VSX2P58304 Y_RNA.655-201ENST00000515919 96 ntBASIC0.49□□□□□ -2.33
VSX2P58304 RNU6-496P-201ENST00000516145 99 ntBASIC0.49□□□□□ -2.33
VSX2P58304 MIR4659A-201ENST00000580269 81 ntBASIC0.49□□□□□ -2.33
VSX2P58304 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.49□□□□□ -2.33
VSX2P58304 AC243829.3-201ENST00000622177 108 ntBASIC0.49□□□□□ -2.33
VSX2P58304 AC098679.4-201ENST00000624241 654 ntBASIC0.49□□□□□ -2.33
VSX2P58304 AC138305.3-201ENST00000624988 240 ntBASIC0.49□□□□□ -2.33
VSX2P58304 RNU6-890P-201ENST00000384121 107 ntBASIC0.48□□□□□ -2.33
VSX2P58304 RNU6-110P-201ENST00000384508 104 ntBASIC0.48□□□□□ -2.33
VSX2P58304 MIR625-201ENST00000385047 85 ntBASIC0.48□□□□□ -2.33
VSX2P58304 RNU6-370P-201ENST00000411008 104 ntBASIC0.48□□□□□ -2.33
VSX2P58304 MTND1P4-201ENST00000435196 415 ntBASIC0.48□□□□□ -2.33
VSX2P58304 FCF1P4-201ENST00000448326 183 ntBASIC0.48□□□□□ -2.33
VSX2P58304 CHEK2P4-201ENST00000450340 246 ntBASIC0.48□□□□□ -2.33
VSX2P58304 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
VSX2P58304 Y_RNA.691-201ENST00000516611 103 ntBASIC0.48□□□□□ -2.33
VSX2P58304 AC012433.1-201ENST00000588916 398 ntBASIC0.48□□□□□ -2.33
VSX2P58304 AC068700.1-201ENST00000565862 3754 ntBASIC0.47□□□□□ -2.33
VSX2P58304 AL589743.1-201ENST00000551932 2712 ntBASIC0.47□□□□□ -2.33
VSX2P58304 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
VSX2P58304 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
VSX2P58304 snoU2-30.1-201ENST00000365012 70 ntBASIC0.47□□□□□ -2.33
VSX2P58304 SNORA72-201ENST00000384339 132 ntBASIC0.47□□□□□ -2.33
VSX2P58304 RNY3P4-201ENST00000384428 101 ntBASIC0.47□□□□□ -2.33
VSX2P58304 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
VSX2P58304 RNU6-131P-201ENST00000391144 107 ntBASIC0.47□□□□□ -2.33
VSX2P58304 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
VSX2P58304 RNU6-470P-201ENST00000515954 104 ntBASIC0.47□□□□□ -2.33
VSX2P58304 RNU7-43P-201ENST00000516554 64 ntBASIC0.47□□□□□ -2.33
VSX2P58304 RNU6-307P-201ENST00000516743 106 ntBASIC0.47□□□□□ -2.33
VSX2P58304 RNU6-264P-201ENST00000517134 104 ntBASIC0.47□□□□□ -2.33
VSX2P58304 TPTEP1-208ENST00000636884 213 ntBASIC0.47□□□□□ -2.33
VSX2P58304 AC010487.4-201ENST00000637027 61 ntBASIC0.47□□□□□ -2.33
VSX2P58304 Y_RNA.279-201ENST00000364763 95 ntBASIC0.46□□□□□ -2.34
VSX2P58304 SNORD81.2-201ENST00000365153 76 ntBASIC0.46□□□□□ -2.34
VSX2P58304 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
VSX2P58304 SNORD111-201ENST00000408139 94 ntBASIC0.46□□□□□ -2.34
VSX2P58304 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
VSX2P58304 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.46□□□□□ -2.34
VSX2P58304 RNU6-1110P-201ENST00000516462 101 ntBASIC0.46□□□□□ -2.34
VSX2P58304 AC011195.1-201ENST00000578177 177 ntBASIC0.46□□□□□ -2.34
VSX2P58304 AC022441.3-201ENST00000605737 136 ntBASIC0.46□□□□□ -2.34
VSX2P58304 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.46□□□□□ -2.34
VSX2P58304 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
VSX2P58304 SNORD81.1-201ENST00000363064 77 ntBASIC0.45□□□□□ -2.34
VSX2P58304 Y_RNA.160-201ENST00000363677 92 ntBASIC0.45□□□□□ -2.34
VSX2P58304 SNORD113.3-201ENST00000364630 78 ntBASIC0.45□□□□□ -2.34
VSX2P58304 Y_RNA.310-201ENST00000365063 113 ntBASIC0.45□□□□□ -2.34
VSX2P58304 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
VSX2P58304 Y_RNA.605-201ENST00000410577 105 ntBASIC0.45□□□□□ -2.34
VSX2P58304 MCFD2P1-201ENST00000417812 300 ntBASIC0.45□□□□□ -2.34
VSX2P58304 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.45□□□□□ -2.34
VSX2P58304 AC022616.4-201ENST00000522985 181 ntBASIC0.45□□□□□ -2.34
VSX2P58304 AC025627.3-201ENST00000582078 182 ntBASIC0.45□□□□□ -2.34
VSX2P58304 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.45□□□□□ -2.34
VSX2P58304 MIR4251-201ENST00000635819 61 ntBASIC0.45□□□□□ -2.34
VSX2P58304 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms