Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Y_RNA.306-201ENST00000365015 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.312-201ENST00000365089 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.322-201ENST00000365151 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 RNU6-144P-201ENST00000383951 107 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 AL627390.1-201ENST00000396055 340 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 AL603910.2-201ENST00000407268 136 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.650-201ENST00000459002 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.777-201ENST00000516982 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 MIR3198-2-201ENST00000577868 80 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 MIR5692C2-201ENST00000577959 77 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 MIR3618-201ENST00000580330 88 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.771-201ENST00000598668 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 AL008718.3-201ENST00000610217 321 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 AC073349.3-201ENST00000617616 186 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.789-201ENST00000622480 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
CLDN20P56880 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CLDN20P56880 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.56□□□□□ -2.16
CLDN20P56880 RNU6-1123P-201ENST00000362347 106 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 RNU6-1205P-201ENST00000363625 106 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 Y_RNA.203-201ENST00000364106 102 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 Y_RNA.253-201ENST00000364562 112 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 Y_RNA.350-201ENST00000365409 98 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 RNU6-203P-201ENST00000384038 104 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 MIR194-1-201ENST00000384892 85 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 AL161935.2-201ENST00000414627 60 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 RPL30P13-201ENST00000418873 348 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 RNU6-437P-201ENST00000459408 95 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 HMGN1P7-201ENST00000491722 313 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN20P56880 SNORA77B-201ENST00000578179 125 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 AL591926.4-201ENST00000616895 298 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 AL513423.1-201ENST00000621695 132 ntBASIC1.55□□□□□ -2.16
CLDN20P56880 Y_RNA.117-201ENST00000363294 101 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 RNU6-674P-201ENST00000363831 107 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 RNA5SP99-201ENST00000364020 114 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 RNU6-211P-201ENST00000384047 107 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 RNU6-424P-201ENST00000384367 105 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 Z98949.2-201ENST00000440996 144 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 PGBD4P5-201ENST00000445958 426 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 SNORD2.1-201ENST00000458762 69 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN20P56880 MIR2681-201ENST00000581814 105 ntBASIC1.54□□□□□ -2.16
CLDN20P56880 MIR424-201ENST00000362227 98 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 Y_RNA.54-201ENST00000362766 105 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 RNU1-17P-201ENST00000363022 152 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 U8.5-201ENST00000364528 136 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 Y_RNA.416-201ENST00000384014 113 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 Y_RNA.478-201ENST00000384358 107 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 Y_RNA.590-201ENST00000410140 107 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN20P56880 MIR4282-201ENST00000583613 67 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 BX284668.6-201ENST00000606899 438 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.53□□□□□ -2.16
CLDN20P56880 AC095038.3-201ENST00000634439 195 ntBASIC1.53□□□□□ -2.16
CLDN20P56880 SNORD68-201ENST00000363214 84 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 Y_RNA.122-201ENST00000363331 96 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 CALM2P4-201ENST00000430810 426 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 SNRPGP10-201ENST00000432323 225 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 SNORD13-201ENST00000459299 104 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.52□□□□□ -2.17
CLDN20P56880 RNA5SP168-201ENST00000516642 112 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 Y_RNA.714-201ENST00000517065 90 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 MIR4762-201ENST00000585261 75 ntBASIC1.52□□□□□ -2.17
CLDN20P56880 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLDN20P56880 MIRLET7C-201ENST00000362160 84 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 Y_RNA.20-201ENST00000362479 113 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 Y_RNA.277-201ENST00000364754 102 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 Y_RNA.293-201ENST00000364908 93 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 RNU6-969P-201ENST00000383900 105 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 MIR522-201ENST00000385071 87 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 MIR660-201ENST00000385235 97 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 U8.16-201ENST00000391279 133 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 RNU6-651P-201ENST00000411040 105 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.51□□□□□ -2.17
CLDN20P56880 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN20P56880 Y_RNA.679-201ENST00000516416 91 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.51□□□□□ -2.17
CLDN20P56880 MIR5688-201ENST00000580619 83 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 MIR4769-201ENST00000584126 77 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 JPX_2.1-201ENST00000614161 69 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 AL353997.5-201ENST00000618886 171 ntBASIC1.51□□□□□ -2.17
CLDN20P56880 MIR367-201ENST00000362299 68 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 RNU6-1209P-201ENST00000363655 107 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 Y_RNA.796-201ENST00000364268 102 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 Y_RNA.799-201ENST00000364992 102 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 Y_RNA.307-201ENST00000365022 117 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 Y_RNA.401-201ENST00000383965 117 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 Y_RNA.447-201ENST00000384184 113 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 Y_RNA.477-201ENST00000384352 108 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms