Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC015726.2-201ENST00000620112 122 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.21□□□□□ -2.38
CLDN6P56747 Y_RNA.368-201ENST00000365547 113 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 Y_RNA.370-201ENST00000365589 108 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 MIR520H-201ENST00000385126 88 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 SNORD28B-201ENST00000390993 75 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 AC074085.1-201ENST00000413598 418 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 TRBVB-201ENST00000477100 408 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 Y_RNA.714-201ENST00000517065 90 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 MIR548AR-201ENST00000582191 57 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 AC018462.2-201ENST00000605375 395 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 AL162730.1-201ENST00000605734 292 ntBASIC0.2□□□□□ -2.38
CLDN6P56747 Y_RNA.51-201ENST00000362725 102 ntBASIC0.19□□□□□ -2.38
CLDN6P56747 RNU6-396P-201ENST00000365369 105 ntBASIC0.19□□□□□ -2.38
CLDN6P56747 MIR520F-201ENST00000384824 87 ntBASIC0.19□□□□□ -2.38
CLDN6P56747 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
CLDN6P56747 RNU6-1148P-201ENST00000410992 104 ntBASIC0.19□□□□□ -2.38
CLDN6P56747 SNRPGP10-201ENST00000432323 225 ntBASIC0.19□□□□□ -2.38
CLDN6P56747 AL355375.2-201ENST00000574825 175 ntBASIC0.19□□□□□ -2.38
CLDN6P56747 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CLDN6P56747 MIR18A-201ENST00000362310 71 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 RNU6-1301P-201ENST00000362724 104 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 MTCO3P10-201ENST00000455912 772 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 U8.19-201ENST00000459095 133 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 AC026782.1-201ENST00000512952 449 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 RNU6-506P-201ENST00000516553 94 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 RNU6-1016P-201ENST00000516689 94 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 AC005972.2-201ENST00000604690 348 ntBASIC0.18□□□□□ -2.38
CLDN6P56747 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
CLDN6P56747 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 RNU6-369P-201ENST00000362515 102 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 Y_RNA.172-201ENST00000363765 102 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 SNORD14E-201ENST00000364009 85 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 RNU4-45P-201ENST00000365469 141 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 Y_RNA.376-201ENST00000365638 108 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 Y_RNA.402-201ENST00000383972 102 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 SNORD38C-201ENST00000384381 69 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 Y_RNA.594-201ENST00000410373 140 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 MTND2P22-201ENST00000444325 1033 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 NDUFA4P2-201ENST00000489989 244 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 RNU6-977P-201ENST00000516411 103 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 MIR3612-201ENST00000579753 87 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 AC092634.7-201ENST00000621022 103 ntBASIC0.17□□□□□ -2.38
CLDN6P56747 RNU6-961P-201ENST00000363893 105 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 RNU6-324P-201ENST00000363957 106 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 Y_RNA.301-201ENST00000364990 103 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 SNORA72-201ENST00000384339 132 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 MIR570-201ENST00000384917 97 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 RNU2-54P-201ENST00000410299 190 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 RNU2-61P-201ENST00000411069 191 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 MTATP6P17-201ENST00000431030 672 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 CHEK2P4-201ENST00000450340 246 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 MTND5P5-201ENST00000503764 376 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 Y_RNA.682-201ENST00000516457 100 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.16□□□□□ -2.38
CLDN6P56747 AC055872.1-201ENST00000570978 278 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 AC018638.8-201ENST00000588755 281 ntBASIC0.16□□□□□ -2.38
CLDN6P56747 MIR103A1-201ENST00000362165 78 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 Y_RNA.60-201ENST00000362831 98 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 Y_RNA.157-201ENST00000363638 102 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 MIR329-2-201ENST00000385029 84 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 RNU6-1050P-201ENST00000410388 107 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 SNORD83.1-201ENST00000411362 77 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.15□□□□□ -2.39
CLDN6P56747 snoU13.21-201ENST00000459368 105 ntBASIC0.15□□□□□ -2.39
CLDN6P56747 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.15□□□□□ -2.39
CLDN6P56747 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.15□□□□□ -2.39
CLDN6P56747 RNU6-934P-201ENST00000365154 107 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 Y_RNA.471-201ENST00000384312 102 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 SNORD116-1-201ENST00000384335 95 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 SNORA51.10-201ENST00000384418 136 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 Y_RNA.559-201ENST00000384686 107 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.14□□□□□ -2.39
CLDN6P56747 AC093534.1-201ENST00000504977 132 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 MIR2355-201ENST00000517199 87 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 AC245505.1-201ENST00000556398 224 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 MIR1244-1-201ENST00000612829 85 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 AC240442.1-201ENST00000616055 283 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 MIR1244-3-201ENST00000635744 85 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 MIR1244-2-201ENST00000636449 85 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 MIR1244-4-202ENST00000636813 85 ntBASIC0.14□□□□□ -2.39
CLDN6P56747 MIR377-201ENST00000362145 69 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 Y_RNA.101-201ENST00000363154 102 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 RNU6-593P-201ENST00000364716 112 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 RNU6-926P-201ENST00000384075 107 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 RNA5SP118-201ENST00000410385 109 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 MTND3P21-201ENST00000433774 331 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.13□□□□□ -2.39
CLDN6P56747 AC116353.2-201ENST00000505332 712 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.13□□□□□ -2.39
CLDN6P56747 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.13□□□□□ -2.39
CLDN6P56747 RNU4-49P-201ENST00000516080 140 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 RNU6-1012P-201ENST00000516606 109 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 Y_RNA.708-201ENST00000516950 96 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms