Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC104985.2-201ENST00000620598 500 ntBASIC0.88□□□□□ -2.27
LIM2P55344 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
LIM2P55344 MIR96-201ENST00000362288 78 ntBASIC0.87□□□□□ -2.27
LIM2P55344 Y_RNA.172-201ENST00000363765 102 ntBASIC0.87□□□□□ -2.27
LIM2P55344 RNU6-969P-201ENST00000383900 105 ntBASIC0.87□□□□□ -2.27
LIM2P55344 RNY1P14-201ENST00000384426 108 ntBASIC0.87□□□□□ -2.27
LIM2P55344 MIR499A-201ENST00000384903 122 ntBASIC0.87□□□□□ -2.27
LIM2P55344 MIR136-201ENST00000385207 82 ntBASIC0.87□□□□□ -2.27
LIM2P55344 MIR1298-201ENST00000408783 112 ntBASIC0.87□□□□□ -2.27
LIM2P55344 AC063976.4-201ENST00000421971 163 ntBASIC0.87□□□□□ -2.27
LIM2P55344 HMGN1P10-201ENST00000474557 553 ntBASIC0.87□□□□□ -2.27
LIM2P55344 RNU7-110P-201ENST00000516891 62 ntBASIC0.87□□□□□ -2.27
LIM2P55344 RNU6-1116P-201ENST00000517269 99 ntBASIC0.87□□□□□ -2.27
LIM2P55344 PRELID3BP2-201ENST00000605362 201 ntBASIC0.87□□□□□ -2.27
LIM2P55344 AL080274.1-201ENST00000605565 220 ntBASIC0.87□□□□□ -2.27
LIM2P55344 AL391903.3-201ENST00000612158 163 ntBASIC0.87□□□□□ -2.27
LIM2P55344 MIR8070-201ENST00000616510 88 ntBASIC0.87□□□□□ -2.27
LIM2P55344 Y_RNA.80-201ENST00000362996 102 ntBASIC0.86□□□□□ -2.27
LIM2P55344 Y_RNA.238-201ENST00000364441 102 ntBASIC0.86□□□□□ -2.27
LIM2P55344 Y_RNA.242-201ENST00000364473 110 ntBASIC0.86□□□□□ -2.27
LIM2P55344 SNORD14.1-201ENST00000365609 90 ntBASIC0.86□□□□□ -2.27
LIM2P55344 Y_RNA.471-201ENST00000384312 102 ntBASIC0.86□□□□□ -2.27
LIM2P55344 RNU6-21P-201ENST00000384710 107 ntBASIC0.86□□□□□ -2.27
LIM2P55344 MIR200A-201ENST00000384875 90 ntBASIC0.86□□□□□ -2.27
LIM2P55344 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
LIM2P55344 RNU6-131P-201ENST00000391144 107 ntBASIC0.86□□□□□ -2.27
LIM2P55344 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.86□□□□□ -2.27
LIM2P55344 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.86□□□□□ -2.27
LIM2P55344 MRPL35P3-201ENST00000421557 364 ntBASIC0.86□□□□□ -2.27
LIM2P55344 PIGPP3-201ENST00000425307 415 ntBASIC0.86□□□□□ -2.27
LIM2P55344 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.86□□□□□ -2.27
LIM2P55344 AC245047.8-201ENST00000456455 284 ntBASIC0.86□□□□□ -2.27
LIM2P55344 Y_RNA.639-201ENST00000458981 102 ntBASIC0.86□□□□□ -2.27
LIM2P55344 SNORD45.4-201ENST00000516629 73 ntBASIC0.86□□□□□ -2.27
LIM2P55344 SNORA74.3-201ENST00000517108 154 ntBASIC0.86□□□□□ -2.27
LIM2P55344 AC040926.1-201ENST00000530195 238 ntBASIC0.86□□□□□ -2.27
LIM2P55344 AC127455.1-201ENST00000565496 145 ntBASIC0.86□□□□□ -2.27
LIM2P55344 MIR4795-201ENST00000584182 89 ntBASIC0.86□□□□□ -2.27
LIM2P55344 SNORD113-5-201ENST00000607261 78 ntBASIC0.86□□□□□ -2.27
LIM2P55344 AL008636.1-201ENST00000625038 1018 ntBASIC0.86□□□□□ -2.27
LIM2P55344 MIR6767-201ENST00000637302 66 ntBASIC0.86□□□□□ -2.27
LIM2P55344 SNORD81.1-201ENST00000363064 77 ntBASIC0.85□□□□□ -2.27
LIM2P55344 Y_RNA.579-201ENST00000390939 94 ntBASIC0.85□□□□□ -2.27
LIM2P55344 SNRPGP10-201ENST00000432323 225 ntBASIC0.85□□□□□ -2.27
LIM2P55344 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.85□□□□□ -2.27
LIM2P55344 SEPT14P8-201ENST00000508026 178 ntBASIC0.85□□□□□ -2.27
LIM2P55344 RNU6-947P-201ENST00000516264 106 ntBASIC0.85□□□□□ -2.27
LIM2P55344 RNU7-43P-201ENST00000516554 64 ntBASIC0.85□□□□□ -2.27
LIM2P55344 MIR2681-201ENST00000581814 105 ntBASIC0.85□□□□□ -2.27
LIM2P55344 POLR3GP1-201ENST00000594073 261 ntBASIC0.85□□□□□ -2.27
LIM2P55344 MIR6504-201ENST00000613520 61 ntBASIC0.85□□□□□ -2.27
LIM2P55344 Y_RNA.804-201ENST00000615262 101 ntBASIC0.85□□□□□ -2.27
LIM2P55344 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.85□□□□□ -2.27
LIM2P55344 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
LIM2P55344 Y_RNA.58-201ENST00000362807 102 ntBASIC0.84□□□□□ -2.27
LIM2P55344 Y_RNA.154-201ENST00000363624 102 ntBASIC0.84□□□□□ -2.27
LIM2P55344 Y_RNA.203-201ENST00000364106 102 ntBASIC0.84□□□□□ -2.27
LIM2P55344 RNY3P1-201ENST00000365085 102 ntBASIC0.84□□□□□ -2.27
LIM2P55344 RNY3-201ENST00000365484 102 ntBASIC0.84□□□□□ -2.27
LIM2P55344 SNORD42.2-201ENST00000365570 69 ntBASIC0.84□□□□□ -2.27
LIM2P55344 RNA5SP247-201ENST00000411181 105 ntBASIC0.84□□□□□ -2.27
LIM2P55344 MTATP6P23-201ENST00000440153 476 ntBASIC0.84□□□□□ -2.27
LIM2P55344 UBL5P1-201ENST00000507979 193 ntBASIC0.84□□□□□ -2.27
LIM2P55344 RNU7-115P-201ENST00000516433 55 ntBASIC0.84□□□□□ -2.27
LIM2P55344 RNU6-113P-201ENST00000516653 101 ntBASIC0.84□□□□□ -2.27
LIM2P55344 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
LIM2P55344 DEFB117-201ENST00000602356 141 ntBASIC0.84□□□□□ -2.27
LIM2P55344 AL096861.1-201ENST00000610899 123 ntBASIC0.84□□□□□ -2.27
LIM2P55344 AC006157.1-201ENST00000611750 366 ntBASIC0.84□□□□□ -2.27
LIM2P55344 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
LIM2P55344 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.84□□□□□ -2.27
LIM2P55344 uc_338.22-201ENST00000622722 187 ntBASIC0.84□□□□□ -2.27
LIM2P55344 RNU6-1084P-201ENST00000362498 107 ntBASIC0.83□□□□□ -2.28
LIM2P55344 RNU6-674P-201ENST00000363831 107 ntBASIC0.83□□□□□ -2.28
LIM2P55344 RNA5SP48-201ENST00000363969 126 ntBASIC0.83□□□□□ -2.28
LIM2P55344 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
LIM2P55344 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
LIM2P55344 MIR1276-201ENST00000408707 83 ntBASIC0.83□□□□□ -2.28
LIM2P55344 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
LIM2P55344 RNU7-21P-201ENST00000459430 62 ntBASIC0.83□□□□□ -2.28
LIM2P55344 AL117351.2-201ENST00000513571 157 ntBASIC0.83□□□□□ -2.28
LIM2P55344 RNU6-1007P-201ENST00000516586 107 ntBASIC0.83□□□□□ -2.28
LIM2P55344 AC090142.3-201ENST00000519012 385 ntBASIC0.83□□□□□ -2.28
LIM2P55344 AC136628.3-201ENST00000521868 290 ntBASIC0.83□□□□□ -2.28
LIM2P55344 AC024405.2-202ENST00000532731 184 ntBASIC0.83□□□□□ -2.28
LIM2P55344 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
LIM2P55344 MIR548AY-201ENST00000617669 107 ntBASIC0.83□□□□□ -2.28
LIM2P55344 Y_RNA.222-201ENST00000364264 102 ntBASIC0.82□□□□□ -2.28
LIM2P55344 POLR2J4-204ENST00000418424 324 ntBASIC0.82□□□□□ -2.28
LIM2P55344 RNU7-90P-201ENST00000459216 62 ntBASIC0.82□□□□□ -2.28
LIM2P55344 AP003716.2-201ENST00000528260 108 ntBASIC0.82□□□□□ -2.28
LIM2P55344 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
LIM2P55344 JPX_2.1-201ENST00000614161 69 ntBASIC0.82□□□□□ -2.28
LIM2P55344 AC090971.5-201ENST00000621102 293 ntBASIC0.82□□□□□ -2.28
LIM2P55344 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
LIM2P55344 MIR373-201ENST00000362273 69 ntBASIC0.81□□□□□ -2.28
LIM2P55344 SNORD14E-201ENST00000364009 85 ntBASIC0.81□□□□□ -2.28
LIM2P55344 Y_RNA.226-201ENST00000364337 114 ntBASIC0.81□□□□□ -2.28
LIM2P55344 RNU1-93P-201ENST00000364704 169 ntBASIC0.81□□□□□ -2.28
LIM2P55344 SNORD50B-201ENST00000364995 70 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms