Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH12P55289 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.76□□□□□ -2.13
CDH12P55289 AL591926.4-201ENST00000616895 298 ntBASIC1.76□□□□□ -2.13
CDH12P55289 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
CDH12P55289 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.75□□□□□ -2.13
CDH12P55289 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CDH12P55289 RNU6-1209P-201ENST00000363655 107 ntBASIC1.75□□□□□ -2.13
CDH12P55289 Y_RNA.229-201ENST00000364347 113 ntBASIC1.75□□□□□ -2.13
CDH12P55289 Y_RNA.785-201ENST00000384290 109 ntBASIC1.75□□□□□ -2.13
CDH12P55289 Y_RNA.500-201ENST00000384466 111 ntBASIC1.75□□□□□ -2.13
CDH12P55289 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
CDH12P55289 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
CDH12P55289 RNA5SP57-201ENST00000459463 123 ntBASIC1.75□□□□□ -2.13
CDH12P55289 RNU6-453P-201ENST00000516819 85 ntBASIC1.75□□□□□ -2.13
CDH12P55289 MIR5688-201ENST00000580619 83 ntBASIC1.75□□□□□ -2.13
CDH12P55289 Z83818.1-201ENST00000603584 150 ntBASIC1.75□□□□□ -2.13
CDH12P55289 AL021707.8-201ENST00000609428 183 ntBASIC1.75□□□□□ -2.13
CDH12P55289 AL773524.1-201ENST00000614065 229 ntBASIC1.75□□□□□ -2.13
CDH12P55289 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CDH12P55289 MT-TT-201ENST00000387460 66 ntBASIC1.74□□□□□ -2.13
CDH12P55289 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.74□□□□□ -2.13
CDH12P55289 STAG3L5P-204ENST00000443759 179 ntBASIC1.74□□□□□ -2.13
CDH12P55289 HMGN1P7-201ENST00000491722 313 ntBASIC1.74□□□□□ -2.13
CDH12P55289 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.74□□□□□ -2.13
CDH12P55289 Y_RNA.700-201ENST00000516806 100 ntBASIC1.74□□□□□ -2.13
CDH12P55289 SNORA81.3-201ENST00000517283 198 ntBASIC1.74□□□□□ -2.13
CDH12P55289 AC022559.1-201ENST00000520905 205 ntBASIC1.74□□□□□ -2.13
CDH12P55289 AC091544.4-201ENST00000555268 342 ntBASIC1.74□□□□□ -2.13
CDH12P55289 RPL23AP91-201ENST00000569211 455 ntBASIC1.74□□□□□ -2.13
CDH12P55289 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
CDH12P55289 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CDH12P55289 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CDH12P55289 Y_RNA.29-201ENST00000362570 113 ntBASIC1.73□□□□□ -2.13
CDH12P55289 RNU6-1020P-201ENST00000363684 107 ntBASIC1.73□□□□□ -2.13
CDH12P55289 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
CDH12P55289 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
CDH12P55289 RNA5SP212-201ENST00000391223 107 ntBASIC1.73□□□□□ -2.13
CDH12P55289 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.73□□□□□ -2.13
CDH12P55289 Y_RNA.793-201ENST00000411222 111 ntBASIC1.73□□□□□ -2.13
CDH12P55289 RNU2-64P-201ENST00000411315 191 ntBASIC1.73□□□□□ -2.13
CDH12P55289 RN7SKP101-201ENST00000411376 320 ntBASIC1.73□□□□□ -2.13
CDH12P55289 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.73□□□□□ -2.13
CDH12P55289 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CDH12P55289 AL138752.1-201ENST00000452964 351 ntBASIC1.73□□□□□ -2.13
CDH12P55289 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH12P55289 AC245047.8-201ENST00000456455 284 ntBASIC1.73□□□□□ -2.13
CDH12P55289 SNORD11-201ENST00000459124 84 ntBASIC1.73□□□□□ -2.13
CDH12P55289 snoU13.27-201ENST00000459278 104 ntBASIC1.73□□□□□ -2.13
CDH12P55289 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH12P55289 OR9P1P-201ENST00000496431 281 ntBASIC1.73□□□□□ -2.13
CDH12P55289 RNA5SP481-201ENST00000516814 122 ntBASIC1.73□□□□□ -2.13
CDH12P55289 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
CDH12P55289 AL627230.6-201ENST00000611129 280 ntBASIC1.73□□□□□ -2.13
CDH12P55289 AC092881.1-201ENST00000638218 2733 ntBASIC1.72□□□□□ -2.13
CDH12P55289 MIR126-201ENST00000362291 85 ntBASIC1.72□□□□□ -2.13
CDH12P55289 Y_RNA.571-201ENST00000384753 98 ntBASIC1.72□□□□□ -2.13
CDH12P55289 RNU6-1031P-201ENST00000384773 107 ntBASIC1.72□□□□□ -2.13
CDH12P55289 MIR522-201ENST00000385071 87 ntBASIC1.72□□□□□ -2.13
CDH12P55289 RNA5SP482-201ENST00000391269 118 ntBASIC1.72□□□□□ -2.13
CDH12P55289 RN7SKP200-201ENST00000410564 320 ntBASIC1.72□□□□□ -2.13
CDH12P55289 AC244636.1-201ENST00000421152 228 ntBASIC1.72□□□□□ -2.13
CDH12P55289 SNRPGP10-201ENST00000432323 225 ntBASIC1.72□□□□□ -2.13
CDH12P55289 NDUFA4P2-201ENST00000489989 244 ntBASIC1.72□□□□□ -2.13
CDH12P55289 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
CDH12P55289 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
CDH12P55289 MIR2681-201ENST00000581814 105 ntBASIC1.72□□□□□ -2.13
CDH12P55289 RNU2-4P-201ENST00000606190 192 ntBASIC1.72□□□□□ -2.13
CDH12P55289 AC004792.1-201ENST00000614523 137 ntBASIC1.72□□□□□ -2.13
CDH12P55289 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDH12P55289 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CDH12P55289 AC008555.8-201ENST00000623602 2168 ntBASIC1.72□□□□□ -2.13
CDH12P55289 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CDH12P55289 Y_RNA.7-201ENST00000362352 102 ntBASIC1.71□□□□□ -2.14
CDH12P55289 SNORD68-201ENST00000363214 84 ntBASIC1.71□□□□□ -2.14
CDH12P55289 Y_RNA.238-201ENST00000364441 102 ntBASIC1.71□□□□□ -2.14
CDH12P55289 MIR616-201ENST00000385293 97 ntBASIC1.71□□□□□ -2.14
CDH12P55289 RNA5SP496-201ENST00000391240 109 ntBASIC1.71□□□□□ -2.14
CDH12P55289 RNU7-34P-201ENST00000459394 64 ntBASIC1.71□□□□□ -2.14
CDH12P55289 AC099513.1-201ENST00000490423 301 ntBASIC1.71□□□□□ -2.14
CDH12P55289 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH12P55289 RN7SKP164-201ENST00000516138 266 ntBASIC1.71□□□□□ -2.14
CDH12P55289 RNU7-28P-201ENST00000516759 62 ntBASIC1.71□□□□□ -2.14
CDH12P55289 AP002392.1-201ENST00000537692 208 ntBASIC1.71□□□□□ -2.14
CDH12P55289 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH12P55289 MIR4299-201ENST00000577899 72 ntBASIC1.71□□□□□ -2.14
CDH12P55289 AL049861.1-201ENST00000603130 150 ntBASIC1.71□□□□□ -2.14
CDH12P55289 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
CDH12P55289 AC021506.2-201ENST00000612354 169 ntBASIC1.71□□□□□ -2.14
CDH12P55289 JPX_2.1-201ENST00000614161 69 ntBASIC1.71□□□□□ -2.14
CDH12P55289 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
CDH12P55289 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH12P55289 MIRLET7C-201ENST00000362160 84 ntBASIC1.7□□□□□ -2.14
CDH12P55289 U8.5-201ENST00000364528 136 ntBASIC1.7□□□□□ -2.14
CDH12P55289 Y_RNA.435-201ENST00000384095 112 ntBASIC1.7□□□□□ -2.14
CDH12P55289 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
CDH12P55289 RNU6-950P-201ENST00000384651 107 ntBASIC1.7□□□□□ -2.14
CDH12P55289 RN7SKP192-201ENST00000411291 327 ntBASIC1.7□□□□□ -2.14
CDH12P55289 MLLT10P1-201ENST00000418346 262 ntBASIC1.7□□□□□ -2.14
CDH12P55289 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH12P55289 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms