Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 RNU6-321P-201ENST00000410912 106 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 PIGPP3-201ENST00000425307 415 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.8□□□□□ -2.28
CRISP3P54108 AC245047.7-201ENST00000440265 293 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 HMGN2P32-201ENST00000444648 269 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 MTND4P19-201ENST00000446659 478 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 AL133373.1-201ENST00000497098 94 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 SNORA31.2-201ENST00000516019 134 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 RNU6-947P-201ENST00000516264 106 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 POLR3GP1-201ENST00000594073 261 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 AP003357.1-201ENST00000604497 148 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 AC007485.1-201ENST00000616755 206 ntBASIC0.8□□□□□ -2.28
CRISP3P54108 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
CRISP3P54108 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CRISP3P54108 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 snoU2-30.1-201ENST00000365012 70 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 Y_RNA.509-201ENST00000384506 99 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 MIR526A1-201ENST00000384897 85 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 MIR15B-201ENST00000385045 98 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 RNU6-131P-201ENST00000391144 107 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 MIR1298-201ENST00000408783 112 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 AC048334.1-201ENST00000477975 159 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 AC005840.1-201ENST00000498412 377 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.79□□□□□ -2.28
CRISP3P54108 RNU7-40P-201ENST00000516397 64 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 SNORD45.4-201ENST00000516629 73 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 DEFB117-201ENST00000602356 141 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
CRISP3P54108 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CRISP3P54108 MIR369-201ENST00000362155 70 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 Y_RNA.460-201ENST00000384255 102 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 MIR222-201ENST00000384992 110 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 MIR136-201ENST00000385207 82 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 RNU6-910P-201ENST00000390844 107 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 MLLT10P1-201ENST00000418346 262 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 SNRPGP10-201ENST00000432323 225 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 POLR2KP2-201ENST00000438155 177 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 Y_RNA.638-201ENST00000459374 113 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 AC108729.3-201ENST00000513484 108 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 RNU7-115P-201ENST00000516433 55 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 Y_RNA.721-201ENST00000517207 102 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.78□□□□□ -2.28
CRISP3P54108 AC087685.1-201ENST00000587507 141 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 C8orf59P2-201ENST00000603441 271 ntBASIC0.78□□□□□ -2.28
CRISP3P54108 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.78□□□□□ -2.29
CRISP3P54108 Y_RNA.203-201ENST00000364106 102 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 Y_RNA.383-201ENST00000383855 97 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 Y_RNA.419-201ENST00000384041 102 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 Y_RNA.445-201ENST00000384168 102 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 SNORA80D-201ENST00000384488 135 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 RNU4-30P-201ENST00000410245 143 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 RNU6-130P-201ENST00000411112 103 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 TRMT112P2-201ENST00000512910 132 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 AC136628.3-201ENST00000521868 290 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 AC024405.2-202ENST00000532731 184 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 AC127455.1-201ENST00000565496 145 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 MIR2681-201ENST00000581814 105 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 PART1_1.1-201ENST00000611761 217 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 AL160413.1-201ENST00000622780 310 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 AC090574.1-201ENST00000623186 233 ntBASIC0.77□□□□□ -2.29
CRISP3P54108 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.77□□□□□ -2.29
CRISP3P54108 MIR337-201ENST00000362281 93 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 Y_RNA.28-201ENST00000362554 111 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 Y_RNA.183-201ENST00000363882 113 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 Y_RNA.222-201ENST00000364264 102 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RNU6-867P-201ENST00000364956 107 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 SNORD50B-201ENST00000364995 70 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 Y_RNA.338-201ENST00000365320 114 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RNU6-969P-201ENST00000383900 105 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 AL590004.1-201ENST00000405321 300 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.76□□□□□ -2.29
CRISP3P54108 PMCHL1-202ENST00000423102 261 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 AC117454.1-201ENST00000491120 168 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RPL23AP54-201ENST00000495129 419 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RNU6-1053P-201ENST00000515930 101 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 SNORD79.1-201ENST00000516069 84 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 SNORD111.1-201ENST00000516421 86 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RNU6-1007P-201ENST00000516586 107 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 SNORA74.3-201ENST00000517108 154 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RNU6-988P-201ENST00000519081 107 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 AC124312.5-201ENST00000604451 268 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 PRELID3BP2-201ENST00000605362 201 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 JPX_2.1-201ENST00000614161 69 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 MIR548AY-201ENST00000617669 107 ntBASIC0.76□□□□□ -2.29
CRISP3P54108 RNY1P10-201ENST00000363268 113 ntBASIC0.75□□□□□ -2.29
CRISP3P54108 Y_RNA.128-201ENST00000363391 112 ntBASIC0.75□□□□□ -2.29
CRISP3P54108 Y_RNA.242-201ENST00000364473 110 ntBASIC0.75□□□□□ -2.29
CRISP3P54108 RNU5E-4P-201ENST00000364931 120 ntBASIC0.75□□□□□ -2.29
CRISP3P54108 U8.7-201ENST00000364940 136 ntBASIC0.75□□□□□ -2.29
CRISP3P54108 RNU6-823P-201ENST00000391042 103 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms