Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RNU6-338P-201ENST00000383888 105 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 SNORA70B-201ENST00000384210 135 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 Y_RNA.478-201ENST00000384358 107 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 MIR522-201ENST00000385071 87 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 Y_RNA.590-201ENST00000410140 107 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 SNORD2.1-201ENST00000458762 69 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 RNU7-12P-201ENST00000516030 62 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 DEFB122-202ENST00000569013 197 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 MIR4648-201ENST00000580107 72 ntBASIC1.84□□□□□ -2.11
PRIM2P49643 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.84□□□□□ -2.11
PRIM2P49643 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PRIM2P49643 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
PRIM2P49643 MIR302D-201ENST00000362275 68 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 MIR367-201ENST00000362299 68 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 Y_RNA.293-201ENST00000364908 93 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 RNA5SP259-201ENST00000365541 109 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 RNU6-211P-201ENST00000384047 107 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 RNU6-163P-201ENST00000384396 106 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 MIR891A-201ENST00000401237 79 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 HMGN2P32-201ENST00000444648 269 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 AC023449.1-201ENST00000454464 154 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.83□□□□□ -2.12
PRIM2P49643 Y_RNA.679-201ENST00000516416 91 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.83□□□□□ -2.12
PRIM2P49643 MIR4724-201ENST00000579485 89 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 BX284668.6-201ENST00000606899 438 ntBASIC1.83□□□□□ -2.12
PRIM2P49643 snoU2-30.1-201ENST00000365012 70 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 Y_RNA.350-201ENST00000365409 98 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 Y_RNA.416-201ENST00000384014 113 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 MIR526A2-201ENST00000390198 65 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 RNA5SP496-201ENST00000391240 109 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 AL603910.2-201ENST00000407268 136 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 MLLT10P1-201ENST00000418346 262 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PRIM2P49643 AC245517.4-201ENST00000448601 281 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.82□□□□□ -2.12
PRIM2P49643 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.82□□□□□ -2.12
PRIM2P49643 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 RNU1-41P-201ENST00000516161 162 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 RNU1-48P-201ENST00000516400 162 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 SUMO2P16-201ENST00000519475 264 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
PRIM2P49643 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
PRIM2P49643 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PRIM2P49643 RNU6-1084P-201ENST00000362498 107 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 RNU6-199P-201ENST00000362954 107 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 Y_RNA.117-201ENST00000363294 101 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 RNU6-1209P-201ENST00000363655 107 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 Y_RNA.796-201ENST00000364268 102 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 Y_RNA.799-201ENST00000364992 102 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 RNU6-1065P-201ENST00000384513 106 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 MIR4282-201ENST00000583613 67 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 Y_RNA.802-201ENST00000614892 130 ntBASIC1.81□□□□□ -2.12
PRIM2P49643 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
PRIM2P49643 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.81□□□□□ -2.12
PRIM2P49643 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PRIM2P49643 Y_RNA.54-201ENST00000362766 105 ntBASIC1.8□□□□□ -2.12
PRIM2P49643 RPL23AP91-201ENST00000569211 455 ntBASIC1.8□□□□□ -2.12
PRIM2P49643 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
PRIM2P49643 AC006006.1-201ENST00000603082 144 ntBASIC1.8□□□□□ -2.12
PRIM2P49643 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.8□□□□□ -2.12
PRIM2P49643 SNORA8.3-201ENST00000384679 139 ntBASIC1.79□□□□□ -2.12
PRIM2P49643 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.79□□□□□ -2.12
PRIM2P49643 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.79□□□□□ -2.12
PRIM2P49643 AC114811.1-201ENST00000507207 168 ntBASIC1.79□□□□□ -2.12
PRIM2P49643 RNA5SP445-201ENST00000515889 115 ntBASIC1.79□□□□□ -2.12
PRIM2P49643 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
PRIM2P49643 MIR4778-201ENST00000577635 80 ntBASIC1.79□□□□□ -2.12
PRIM2P49643 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PRIM2P49643 Y_RNA.122-201ENST00000363331 96 ntBASIC1.78□□□□□ -2.12
PRIM2P49643 Y_RNA.336-201ENST00000365307 109 ntBASIC1.78□□□□□ -2.12
PRIM2P49643 MIR452-201ENST00000385020 85 ntBASIC1.78□□□□□ -2.12
PRIM2P49643 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
PRIM2P49643 RN7SKP51-201ENST00000410781 304 ntBASIC1.78□□□□□ -2.12
PRIM2P49643 SNX2P2-201ENST00000424553 323 ntBASIC1.78□□□□□ -2.12
PRIM2P49643 AC027119.1-201ENST00000440877 241 ntBASIC1.78□□□□□ -2.12
PRIM2P49643 SNORD45.4-201ENST00000516629 73 ntBASIC1.78□□□□□ -2.12
PRIM2P49643 Y_RNA.20-201ENST00000362479 113 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 SNORD14E-201ENST00000364009 85 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 Y_RNA.277-201ENST00000364754 102 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 SNORA2.2-201ENST00000365473 135 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 MIR802-201ENST00000390235 94 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 RN7SKP101-201ENST00000411376 320 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 PIGPP3-201ENST00000425307 415 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 SNORD11-201ENST00000459124 84 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 Y_RNA.638-201ENST00000459374 113 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 RNU6-322P-201ENST00000516010 103 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 MIR3937-201ENST00000580135 106 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 AL513534.2-201ENST00000603836 250 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.77□□□□□ -2.13
PRIM2P49643 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PRIM2P49643 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.77□□□□□ -2.13
PRIM2P49643 Y_RNA.304-201ENST00000365011 112 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms