Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL008987.1-201ENST00000415528 237 ntBASIC-1.04□□□□□ -2.58
HTTP42858 MTCO2P11-201ENST00000431069 680 ntBASIC-1.04□□□□□ -2.58
HTTP42858 AC236972.2-201ENST00000434979 310 ntBASIC-1.04□□□□□ -2.58
HTTP42858 AC114878.1-201ENST00000441166 358 ntBASIC-1.04□□□□□ -2.58
HTTP42858 MTCO3P8-201ENST00000453691 755 ntBASIC-1.04□□□□□ -2.58
HTTP42858 RPL39P5-202ENST00000512505 151 ntBASIC-1.04□□□□□ -2.58
HTTP42858 RNY4P37-201ENST00000516225 96 ntBASIC-1.04□□□□□ -2.58
HTTP42858 RNU6-479P-201ENST00000516348 105 ntBASIC-1.04□□□□□ -2.58
HTTP42858 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.04□□□□□ -2.58
HTTP42858 MIRLET7B-201ENST00000385140 83 ntBASIC-1.04□□□□□ -2.58
HTTP42858 RNU6-817P-201ENST00000391083 104 ntBASIC-1.04□□□□□ -2.58
HTTP42858 snoU13.13-201ENST00000458842 104 ntBASIC-1.04□□□□□ -2.58
HTTP42858 MTCO2P6-201ENST00000463134 685 ntBASIC-1.04□□□□□ -2.58
HTTP42858 AC010655.3-201ENST00000478818 450 ntBASIC-1.04□□□□□ -2.58
HTTP42858 RNU7-172P-201ENST00000517125 64 ntBASIC-1.04□□□□□ -2.58
HTTP42858 RNU7-161P-201ENST00000517289 62 ntBASIC-1.04□□□□□ -2.58
HTTP42858 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.04□□□□□ -2.58
HTTP42858 SNORD115-34-201ENST00000362441 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-12-201ENST00000362583 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-29-201ENST00000362834 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-9-201ENST00000362912 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-21-201ENST00000362963 81 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-14-201ENST00000363090 81 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-13-201ENST00000363358 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-11-201ENST00000363616 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-5-201ENST00000363633 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-39-201ENST00000363694 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-4-201ENST00000363810 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-16-201ENST00000363887 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-6-201ENST00000363942 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD114-17-201ENST00000364699 75 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-15-201ENST00000364809 81 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-1-201ENST00000364961 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-26-201ENST00000365067 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-10-201ENST00000365073 81 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-43-201ENST00000365503 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 RNU6-744P-201ENST00000365557 107 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-36-201ENST00000365629 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.05□□□□□ -2.58
HTTP42858 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNRPGP10-201ENST00000432323 225 ntBASIC-1.05□□□□□ -2.58
HTTP42858 MTND4P18-201ENST00000447010 465 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD65B-201ENST00000459126 73 ntBASIC-1.05□□□□□ -2.58
HTTP42858 AC105417.1-201ENST00000514691 285 ntBASIC-1.05□□□□□ -2.58
HTTP42858 RNU6-107P-201ENST00000516643 102 ntBASIC-1.05□□□□□ -2.58
HTTP42858 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.05□□□□□ -2.58
HTTP42858 AC007012.1-201ENST00000567192 175 ntBASIC-1.05□□□□□ -2.58
HTTP42858 MIR4762-201ENST00000585261 75 ntBASIC-1.05□□□□□ -2.58
HTTP42858 SNORD115-40-201ENST00000606510 82 ntBASIC-1.05□□□□□ -2.58
HTTP42858 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.05□□□□□ -2.58
HTTP42858 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.05□□□□□ -2.58
HTTP42858 AC078809.1-201ENST00000427601 140 ntBASIC-1.05□□□□□ -2.58
HTTP42858 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.05□□□□□ -2.58
HTTP42858 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.05□□□□□ -2.58
HTTP42858 AF250324.2-201ENST00000608299 610 ntBASIC-1.05□□□□□ -2.58
HTTP42858 AL078596.1-201ENST00000624856 447 ntBASIC-1.05□□□□□ -2.58
HTTP42858 AC013437.2-201ENST00000639587 677 ntBASIC-1.05□□□□□ -2.58
HTTP42858 MIR599-201ENST00000385069 95 ntBASIC-1.06□□□□□ -2.58
HTTP42858 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.06□□□□□ -2.58
HTTP42858 AL031667.1-201ENST00000440222 725 ntBASIC-1.06□□□□□ -2.58
HTTP42858 RNA5SP484-201ENST00000458857 111 ntBASIC-1.06□□□□□ -2.58
HTTP42858 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.06□□□□□ -2.58
HTTP42858 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.06□□□□□ -2.58
HTTP42858 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.06□□□□□ -2.58
HTTP42858 MIR544B-201ENST00000582372 78 ntBASIC-1.06□□□□□ -2.58
HTTP42858 MIR5704-201ENST00000584029 77 ntBASIC-1.06□□□□□ -2.58
HTTP42858 AC131235.4-201ENST00000609288 620 ntBASIC-1.06□□□□□ -2.58
HTTP42858 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.06□□□□□ -2.58
HTTP42858 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.06□□□□□ -2.58
HTTP42858 MIR208B-201ENST00000401172 77 ntBASIC-1.06□□□□□ -2.58
HTTP42858 AL158050.1-201ENST00000416077 457 ntBASIC-1.06□□□□□ -2.58
HTTP42858 SNORA25.16-201ENST00000516741 121 ntBASIC-1.06□□□□□ -2.58
HTTP42858 RNU7-181P-201ENST00000517234 74 ntBASIC-1.06□□□□□ -2.58
HTTP42858 AC100767.1-201ENST00000528178 123 ntBASIC-1.06□□□□□ -2.58
HTTP42858 AC026470.2-201ENST00000561492 181 ntBASIC-1.06□□□□□ -2.58
HTTP42858 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.06□□□□□ -2.58
HTTP42858 RNU2-42P-201ENST00000410697 113 ntBASIC-1.06□□□□□ -2.58
HTTP42858 MTCO3P19-201ENST00000415864 321 ntBASIC-1.06□□□□□ -2.58
HTTP42858 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-1.06□□□□□ -2.58
HTTP42858 AC090616.2-202ENST00000584248 222 ntBASIC-1.06□□□□□ -2.58
HTTP42858 AC139792.3-201ENST00000623525 224 ntBASIC-1.06□□□□□ -2.58
HTTP42858 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
HTTP42858 RNU6-252P-201ENST00000363232 107 ntBASIC-1.07□□□□□ -2.58
HTTP42858 SNORA36A-201ENST00000384221 132 ntBASIC-1.07□□□□□ -2.58
HTTP42858 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.07□□□□□ -2.58
HTTP42858 MTCO3P17-201ENST00000443775 513 ntBASIC-1.07□□□□□ -2.58
HTTP42858 RNU6-341P-201ENST00000516973 96 ntBASIC-1.07□□□□□ -2.58
HTTP42858 U6.42-201ENST00000618440 107 ntBASIC-1.07□□□□□ -2.58
HTTP42858 AC137590.2-201ENST00000619709 240 ntBASIC-1.07□□□□□ -2.58
HTTP42858 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.07□□□□□ -2.58
HTTP42858 RNA5SP133-201ENST00000363368 119 ntBASIC-1.07□□□□□ -2.58
HTTP42858 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.07□□□□□ -2.58
HTTP42858 MTATP6P18-201ENST00000417994 673 ntBASIC-1.07□□□□□ -2.58
HTTP42858 AC073464.1-201ENST00000429823 534 ntBASIC-1.07□□□□□ -2.58
HTTP42858 RNU6-980P-201ENST00000516925 103 ntBASIC-1.07□□□□□ -2.58
HTTP42858 RNU6-958P-201ENST00000516995 106 ntBASIC-1.07□□□□□ -2.58
HTTP42858 AC087894.1-201ENST00000538359 518 ntBASIC-1.07□□□□□ -2.58
HTTP42858 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.07□□□□□ -2.58
HTTP42858 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms