Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AL133255.1-201ENST00000606374 441 ntBASIC0.63□□□□□ -2.31
COL5A3P25940 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.63□□□□□ -2.31
COL5A3P25940 AC138305.3-201ENST00000624988 240 ntBASIC0.63□□□□□ -2.31
COL5A3P25940 MIR409-201ENST00000362237 79 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 Y_RNA.252-201ENST00000364556 101 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 Y_RNA.267-201ENST00000364679 109 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 Y_RNA.446-201ENST00000384178 104 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 RNU6-376P-201ENST00000384731 106 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 MT-TD-201ENST00000387419 68 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 Y_RNA.592-201ENST00000410274 109 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 AL354751.2-201ENST00000415471 210 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 MTND4LP11-201ENST00000422184 280 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 TOMM22P2-201ENST00000430735 237 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 MTATP6P23-201ENST00000440153 476 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 AC027119.1-201ENST00000440877 241 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.62□□□□□ -2.31
COL5A3P25940 SNORA25.10-201ENST00000515926 124 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 RNU6-1337P-201ENST00000516525 95 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 RNU6-63P-201ENST00000516690 95 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 Y_RNA.702-201ENST00000516843 96 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 RNU6-341P-201ENST00000516973 96 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.62□□□□□ -2.31
COL5A3P25940 AC005828.6-201ENST00000606610 232 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 AC008873.1-201ENST00000625051 138 ntBASIC0.62□□□□□ -2.31
COL5A3P25940 Y_RNA.128-201ENST00000363391 112 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 Y_RNA.143-201ENST00000363520 106 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU6-801P-201ENST00000364087 105 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 Y_RNA.265-201ENST00000364677 108 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU1-36P-201ENST00000365130 165 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 SNORD14.1-201ENST00000365609 90 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU6-926P-201ENST00000384075 107 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU6-950P-201ENST00000384651 107 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU2-70P-201ENST00000410718 179 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 SNORD19B-201ENST00000459623 84 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 Y_RNA.661-201ENST00000516003 99 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU7-12P-201ENST00000516030 62 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 SNORA31.10-201ENST00000516482 106 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU2-12P-201ENST00000517216 168 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.61□□□□□ -2.31
COL5A3P25940 AL390123.1-201ENST00000603216 237 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 AC011476.5-201ENST00000615594 130 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 AC007485.1-201ENST00000616755 206 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 AC127459.3-201ENST00000624328 466 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU6-1175P-201ENST00000365200 107 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 SNORD42.2-201ENST00000365570 69 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 Y_RNA.445-201ENST00000384168 102 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU6-1297P-201ENST00000384415 104 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 Y_RNA.571-201ENST00000384753 98 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU6-1009P-201ENST00000390996 107 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 SNORD78.2-201ENST00000391076 69 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 Y_RNA.645-201ENST00000391229 102 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 MIR891A-201ENST00000401237 79 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 MTCO3P19-201ENST00000415864 321 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 SNX2P2-201ENST00000424553 323 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 AC104692.1-201ENST00000472406 90 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 RNU6-1170P-201ENST00000515974 106 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 SNORA70.12-201ENST00000516084 153 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 AC005176.2-201ENST00000596933 147 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 AL021879.1-201ENST00000611756 288 ntBASIC0.61□□□□□ -2.31
COL5A3P25940 MTND4P29-201ENST00000503122 1372 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 RNU6-1115P-201ENST00000362490 106 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 Y_RNA.31-201ENST00000362574 102 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 Y_RNA.61-201ENST00000362835 102 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 RNU6-833P-201ENST00000363486 107 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 Y_RNA.172-201ENST00000363765 102 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 Y_RNA.329-201ENST00000365209 107 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 Y_RNA.341-201ENST00000365341 102 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 RNU6-474P-201ENST00000384243 107 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 Y_RNA.488-201ENST00000384403 102 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 SNORD116-13-201ENST00000384408 92 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 RNU6-30P-201ENST00000384561 107 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 RNU6-1031P-201ENST00000384773 107 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 MIR562-201ENST00000384894 95 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 U8.16-201ENST00000391279 133 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 MRPL42P3-201ENST00000401492 326 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 AC022028.1-201ENST00000412054 408 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.6□□□□□ -2.31
COL5A3P25940 DYNLT3P2-201ENST00000442517 295 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 SNORD116-28-201ENST00000516123 91 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 RNU6-1291P-201ENST00000516591 104 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 RNA5SP168-201ENST00000516642 112 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 RNU4-77P-201ENST00000516692 156 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 AC093027.1-201ENST00000546698 429 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 AC005972.2-201ENST00000604690 348 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 Y_RNA.772-201ENST00000606692 102 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 AC106754.2-201ENST00000623006 233 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 AC005592.1-201ENST00000566527 1640 ntBASIC0.6□□□□□ -2.31
COL5A3P25940 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
COL5A3P25940 SNORA1B-201ENST00000362535 133 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 Y_RNA.331-201ENST00000365267 102 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 Y_RNA.462-201ENST00000384268 102 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 RNU6-505P-201ENST00000384427 107 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 MIR628-201ENST00000385229 95 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 RNA5SP482-201ENST00000391269 118 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 MLLT10P1-201ENST00000418346 262 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.59□□□□□ -2.31
COL5A3P25940 AC005042.3-201ENST00000453230 174 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 RNU6-758P-201ENST00000516292 89 ntBASIC0.59□□□□□ -2.31
COL5A3P25940 Y_RNA.701-201ENST00000516812 110 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms