Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 Y_RNA.590-201ENST00000410140 107 ntBASIC1.78□□□□□ -2.12
TNFSF4P23510 AL139156.1-201ENST00000412785 841 ntBASIC1.78□□□□□ -2.12
TNFSF4P23510 HMGN2P32-201ENST00000444648 269 ntBASIC1.78□□□□□ -2.12
TNFSF4P23510 SNORD2.1-201ENST00000458762 69 ntBASIC1.78□□□□□ -2.12
TNFSF4P23510 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.78□□□□□ -2.12
TNFSF4P23510 RNA5SP445-201ENST00000515889 115 ntBASIC1.78□□□□□ -2.12
TNFSF4P23510 MIR4724-201ENST00000579485 89 ntBASIC1.78□□□□□ -2.12
TNFSF4P23510 MIR4503-201ENST00000582187 83 ntBASIC1.78□□□□□ -2.12
TNFSF4P23510 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.78□□□□□ -2.12
TNFSF4P23510 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.77□□□□□ -2.13
TNFSF4P23510 Y_RNA.117-201ENST00000363294 101 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 Y_RNA.242-201ENST00000364473 110 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 AL603910.2-201ENST00000407268 136 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 PIGPP3-201ENST00000425307 415 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 AC027119.1-201ENST00000440877 241 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFSF4P23510 AC104435.1-201ENST00000483483 166 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.77□□□□□ -2.13
TNFSF4P23510 AC114811.1-201ENST00000507207 168 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 Y_RNA.679-201ENST00000516416 91 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 RNU1-40P-201ENST00000516816 164 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 RNU1-97P-201ENST00000516872 164 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 RPL23AP91-201ENST00000569211 455 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 AC062037.2-201ENST00000610137 73 ntBASIC1.77□□□□□ -2.13
TNFSF4P23510 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TNFSF4P23510 SNORA64-201ENST00000384674 134 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 MIR526A2-201ENST00000390198 65 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 RNA5SP496-201ENST00000391240 109 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 RN7SKP51-201ENST00000410781 304 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.76□□□□□ -2.13
TNFSF4P23510 SNX2P2-201ENST00000424553 323 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 AC023449.1-201ENST00000454464 154 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 SNORD45.4-201ENST00000516629 73 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 RNU6-1116P-201ENST00000517269 99 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 MIR3937-201ENST00000580135 106 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 MIR3149-201ENST00000584629 83 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 BX284668.6-201ENST00000606899 438 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 Y_RNA.802-201ENST00000614892 130 ntBASIC1.76□□□□□ -2.13
TNFSF4P23510 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TNFSF4P23510 Y_RNA.416-201ENST00000384014 113 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 MIR452-201ENST00000385020 85 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 AC093850.1-201ENST00000454121 251 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 RNU6-717P-201ENST00000459076 104 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 AC025033.1-201ENST00000463883 194 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 RN7SL429P-201ENST00000479090 223 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 RN7SL489P-201ENST00000486185 223 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 RN7SL327P-201ENST00000488659 223 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 RNU6-322P-201ENST00000516010 103 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 AC019176.1-201ENST00000518519 225 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 AC004817.2-201ENST00000561794 651 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 MIR4282-201ENST00000583613 67 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 AC006006.1-201ENST00000603082 144 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 AL365434.2-201ENST00000607979 234 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 RN7SL853P-201ENST00000617250 223 ntBASIC1.75□□□□□ -2.13
TNFSF4P23510 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TNFSF4P23510 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TNFSF4P23510 Y_RNA.54-201ENST00000362766 105 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 SNORD14E-201ENST00000364009 85 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 Y_RNA.336-201ENST00000365307 109 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 Y_RNA.350-201ENST00000365409 98 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 SNORA2.2-201ENST00000365473 135 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 Y_RNA.478-201ENST00000384358 107 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 SNORA8.3-201ENST00000384679 139 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TNFSF4P23510 SNORD11-201ENST00000459124 84 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.74□□□□□ -2.13
TNFSF4P23510 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.74□□□□□ -2.13
TNFSF4P23510 IGKV3-31-201ENST00000523109 329 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 AC106754.2-201ENST00000623006 233 ntBASIC1.74□□□□□ -2.13
TNFSF4P23510 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TNFSF4P23510 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
TNFSF4P23510 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
TNFSF4P23510 Y_RNA.122-201ENST00000363331 96 ntBASIC1.73□□□□□ -2.13
TNFSF4P23510 MIR653-201ENST00000385279 96 ntBASIC1.73□□□□□ -2.13
TNFSF4P23510 MIR802-201ENST00000390235 94 ntBASIC1.73□□□□□ -2.13
TNFSF4P23510 MIR1278-201ENST00000408753 81 ntBASIC1.73□□□□□ -2.13
TNFSF4P23510 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.73□□□□□ -2.13
TNFSF4P23510 AC092991.1-201ENST00000477176 376 ntBASIC1.73□□□□□ -2.13
TNFSF4P23510 RNU6-902P-201ENST00000517212 91 ntBASIC1.73□□□□□ -2.13
TNFSF4P23510 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.73□□□□□ -2.13
TNFSF4P23510 AC090049.2-201ENST00000550377 109 ntBASIC1.73□□□□□ -2.13
TNFSF4P23510 AL513534.2-201ENST00000603836 250 ntBASIC1.73□□□□□ -2.13
TNFSF4P23510 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.73□□□□□ -2.13
TNFSF4P23510 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TNFSF4P23510 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.72□□□□□ -2.13
TNFSF4P23510 RNU6-457P-201ENST00000363999 107 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 Y_RNA.277-201ENST00000364754 102 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 SNORD50B-201ENST00000364995 70 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 RNU6-383P-201ENST00000410864 94 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 RN7SKP101-201ENST00000411376 320 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 AL445646.1-201ENST00000431784 216 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 Y_RNA.638-201ENST00000459374 113 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 RPL30P7-201ENST00000479312 323 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 NDUFA4P2-201ENST00000489989 244 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 MIR3945-201ENST00000581853 98 ntBASIC1.72□□□□□ -2.13
TNFSF4P23510 AL121890.5-201ENST00000620848 304 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms