Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNU7-21P-201ENST00000459430 62 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 RNU6-976P-201ENST00000516086 111 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 RNU6-875P-201ENST00000516488 106 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 SNORD45.4-201ENST00000516629 73 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 SNORA74.3-201ENST00000517108 154 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 MIR6788-201ENST00000618842 66 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
XRCC1P18887 RNU6-1115P-201ENST00000362490 106 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 Y_RNA.796-201ENST00000364268 102 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 Y_RNA.799-201ENST00000364992 102 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 Y_RNA.355-201ENST00000365462 98 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 Y_RNA.368-201ENST00000365547 113 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 RNY1P14-201ENST00000384426 108 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 RNU6-131P-201ENST00000391144 107 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 MLLT10P1-201ENST00000418346 262 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 RPS26P48-201ENST00000491713 339 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 RNA5SP220-201ENST00000516298 104 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 AC092447.9-201ENST00000603395 144 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
XRCC1P18887 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
XRCC1P18887 Y_RNA.331-201ENST00000365267 102 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 Y_RNA.341-201ENST00000365341 102 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 SNORD63-201ENST00000384262 68 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 MIR548J-201ENST00000408833 112 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 AL160004.2-201ENST00000432935 350 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 RNU6-966P-201ENST00000516479 104 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.82□□□□□ -2.28
XRCC1P18887 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.82□□□□□ -2.28
XRCC1P18887 MIR5188-201ENST00000583467 113 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 AC087685.1-201ENST00000587507 141 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 AL078603.1-201ENST00000603824 313 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 AC011373.1-201ENST00000607270 237 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 AL606534.2-204ENST00000635008 178 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
XRCC1P18887 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 Y_RNA.310-201ENST00000365063 113 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 SNORD14.1-201ENST00000365609 90 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 RNU6-969P-201ENST00000383900 105 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 MIR520C-201ENST00000385005 87 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 SNRPGP10-201ENST00000432323 225 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 MTND5P20-201ENST00000448677 143 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.81□□□□□ -2.28
XRCC1P18887 RNU7-43P-201ENST00000516554 64 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 RNU4-77P-201ENST00000516692 156 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 MIR3192-201ENST00000584920 77 ntBASIC0.81□□□□□ -2.28
XRCC1P18887 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.81□□□□□ -2.28
XRCC1P18887 RNA5SP264-201ENST00000363115 107 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 Y_RNA.122-201ENST00000363331 96 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 Y_RNA.269-201ENST00000364685 89 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 Y_RNA.439-201ENST00000384119 94 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 RNU6-42P-201ENST00000384165 107 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 Y_RNA.458-201ENST00000384240 102 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 Y_RNA.508-201ENST00000384502 114 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 U8.20-201ENST00000459445 131 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 Y_RNA.661-201ENST00000516003 99 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 AC090142.3-201ENST00000519012 385 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 CYP3A137P-201ENST00000562436 69 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 MIR151B-201ENST00000584249 96 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 POLR3GP1-201ENST00000594073 261 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 AP003357.1-201ENST00000604497 148 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 AL020996.3-201ENST00000606617 222 ntBASIC0.8□□□□□ -2.28
XRCC1P18887 SNORD50B-201ENST00000364995 70 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 Y_RNA.303-201ENST00000364998 94 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 Y_RNA.356-201ENST00000365475 113 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 Y_RNA.496-201ENST00000384444 101 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 Y_RNA.529-201ENST00000384586 119 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 Y_RNA.551-201ENST00000384661 102 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 MIR516B2-201ENST00000385190 85 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 SNORA75.2-201ENST00000391138 150 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 SNORA75.3-201ENST00000391231 150 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.79□□□□□ -2.28
XRCC1P18887 SNORD124-201ENST00000459577 104 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 PDCD5P2-201ENST00000507570 312 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 RNU7-110P-201ENST00000516891 62 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 RNU6-1223P-201ENST00000517124 104 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 AC108706.1-201ENST00000611053 297 ntBASIC0.79□□□□□ -2.28
XRCC1P18887 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
XRCC1P18887 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
XRCC1P18887 Y_RNA.5-201ENST00000362334 102 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 RNA5SP48-201ENST00000363969 126 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 SNORD14E-201ENST00000364009 85 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 Y_RNA.203-201ENST00000364106 102 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 RNU4-50P-201ENST00000364361 141 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 RNU6-1248P-201ENST00000391096 64 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 AF228730.4-201ENST00000421457 183 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 FABP5P4-201ENST00000437203 171 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 HMGN1P10-201ENST00000474557 553 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 RNU6-475P-201ENST00000516073 104 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 Y_RNA.702-201ENST00000516843 96 ntBASIC0.78□□□□□ -2.28
XRCC1P18887 AP003716.2-201ENST00000528260 108 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms