Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU7-134P-201ENST00000458997 64 ntBASIC-1.88□□□□□ -2.71
HMGA1P17096 RNU6-323P-201ENST00000521915 107 ntBASIC-1.88□□□□□ -2.71
HMGA1P17096 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.88□□□□□ -2.71
HMGA1P17096 RNU6-926P-201ENST00000384075 107 ntBASIC-1.89□□□□□ -2.71
HMGA1P17096 SNORA72.6-201ENST00000384520 129 ntBASIC-1.89□□□□□ -2.71
HMGA1P17096 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.89□□□□□ -2.71
HMGA1P17096 AL117351.1-201ENST00000438864 766 ntBASIC-1.89□□□□□ -2.71
HMGA1P17096 RNU2-11P-201ENST00000459191 187 ntBASIC-1.89□□□□□ -2.71
HMGA1P17096 AC010598.1-201ENST00000510378 103 ntBASIC-1.89□□□□□ -2.71
HMGA1P17096 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.89□□□□□ -2.71
HMGA1P17096 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.89□□□□□ -2.71
HMGA1P17096 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.89□□□□□ -2.71
HMGA1P17096 AC023158.2-201ENST00000614876 543 ntBASIC-1.89□□□□□ -2.71
HMGA1P17096 MIR889-201ENST00000401280 79 ntBASIC-1.9□□□□□ -2.71
HMGA1P17096 RNU2-39P-201ENST00000410604 198 ntBASIC-1.9□□□□□ -2.71
HMGA1P17096 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.9□□□□□ -2.71
HMGA1P17096 AP003733.2-201ENST00000529409 171 ntBASIC-1.9□□□□□ -2.71
HMGA1P17096 DEFB131E-201ENST00000532329 154 ntBASIC-1.9□□□□□ -2.71
HMGA1P17096 MIR4423-201ENST00000580922 80 ntBASIC-1.9□□□□□ -2.71
HMGA1P17096 MIR6082-201ENST00000613604 109 ntBASIC-1.9□□□□□ -2.71
HMGA1P17096 AL354950.2-201ENST00000617939 290 ntBASIC-1.9□□□□□ -2.71
HMGA1P17096 AC023510.2-201ENST00000622162 746 ntBASIC-1.9□□□□□ -2.71
HMGA1P17096 RNU6-727P-201ENST00000363592 107 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 SNORA24.1-201ENST00000384401 135 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 TIMM9P2-201ENST00000419324 266 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 MTCO2P27-201ENST00000420740 428 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 MTCO2P11-201ENST00000431069 680 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 MTND1P32-201ENST00000433043 938 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 MTCO1P27-201ENST00000448269 226 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 RNU7-104P-201ENST00000459398 79 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 RNU6-329P-201ENST00000459618 107 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 AC018710.1-201ENST00000506509 158 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 AP003072.1-201ENST00000531740 145 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 MIR4473-201ENST00000583731 91 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 POLR3GP1-201ENST00000594073 261 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 AC137590.2-201ENST00000619709 240 ntBASIC-1.91□□□□□ -2.72
HMGA1P17096 MIR30D-201ENST00000362283 70 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 SNORD18.1-201ENST00000363807 70 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 MTND4LP14-201ENST00000429447 288 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 AL512286.1-201ENST00000439244 400 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 RPL39P25-201ENST00000449384 154 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.92□□□□□ -2.72
HMGA1P17096 RNA5SP20-201ENST00000515976 84 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 AP000676.1-201ENST00000533307 52 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 BNIP3P40-201ENST00000596017 556 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 AC139792.3-201ENST00000623525 224 ntBASIC-1.92□□□□□ -2.72
HMGA1P17096 RNA5SP245-201ENST00000364239 121 ntBASIC-1.93□□□□□ -2.72
HMGA1P17096 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.93□□□□□ -2.72
HMGA1P17096 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.93□□□□□ -2.72
HMGA1P17096 MTND4P3-201ENST00000417829 541 ntBASIC-1.93□□□□□ -2.72
HMGA1P17096 AC236972.2-201ENST00000434979 310 ntBASIC-1.93□□□□□ -2.72
HMGA1P17096 RNA5SP484-201ENST00000458857 111 ntBASIC-1.93□□□□□ -2.72
HMGA1P17096 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.93□□□□□ -2.72
HMGA1P17096 SNORA63.5-201ENST00000363548 123 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 AC114878.1-201ENST00000441166 358 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.94□□□□□ -2.72
HMGA1P17096 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.94□□□□□ -2.72
HMGA1P17096 snoU13.2-201ENST00000459201 104 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 RNU6-765P-201ENST00000516916 99 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.94□□□□□ -2.72
HMGA1P17096 AL450270.1-201ENST00000606160 391 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 AL049777.1-201ENST00000622740 518 ntBASIC-1.94□□□□□ -2.72
HMGA1P17096 SNORD115-28-201ENST00000363931 81 ntBASIC-1.95□□□□□ -2.72
HMGA1P17096 RNU6-119P-201ENST00000364882 107 ntBASIC-1.95□□□□□ -2.72
HMGA1P17096 SNORA20B-201ENST00000384220 132 ntBASIC-1.95□□□□□ -2.72
HMGA1P17096 MIR527-201ENST00000385244 85 ntBASIC-1.95□□□□□ -2.72
HMGA1P17096 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.95□□□□□ -2.72
HMGA1P17096 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.95□□□□□ -2.72
HMGA1P17096 snoU13.13-201ENST00000458842 104 ntBASIC-1.95□□□□□ -2.72
HMGA1P17096 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.95□□□□□ -2.72
HMGA1P17096 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.95□□□□□ -2.72
HMGA1P17096 AC069545.1-201ENST00000605671 358 ntBASIC-1.95□□□□□ -2.72
HMGA1P17096 AC073343.1-201ENST00000328239 651 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 RNU6-621P-201ENST00000364752 109 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 RNA5SP86-201ENST00000390869 98 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 USMG5P1-201ENST00000425964 177 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 MTATP6P17-201ENST00000431030 672 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.96□□□□□ -2.72
HMGA1P17096 AC010587.1-201ENST00000505809 469 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 RPL39P5-202ENST00000512505 151 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 RNU7-51P-201ENST00000516560 62 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 MTND1P5-201ENST00000517906 940 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 AC073648.5-201ENST00000603502 305 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 AC131235.4-201ENST00000609288 620 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.96□□□□□ -2.72
HMGA1P17096 SNORD114-17-201ENST00000364699 75 ntBASIC-1.97□□□□□ -2.72
HMGA1P17096 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.97□□□□□ -2.72
HMGA1P17096 SNORD50B-201ENST00000364995 70 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms