Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RN7SKP164-201ENST00000516138 266 ntBASIC2.56□□□□□ -2
APPP05067 SNORA31.25-201ENST00000517242 134 ntBASIC2.56□□□□□ -2
APPP05067 AC109810.1-201ENST00000534066 224 ntBASIC2.56□□□□□ -2
APPP05067 MIR4648-201ENST00000580107 72 ntBASIC2.56□□□□□ -2
APPP05067 MIR4744-201ENST00000581563 82 ntBASIC2.56□□□□□ -2
APPP05067 AL096840.1-201ENST00000603287 93 ntBASIC2.56□□□□□ -2
APPP05067 AL021707.8-201ENST00000609428 183 ntBASIC2.56□□□□□ -2
APPP05067 Y_RNA.170-201ENST00000363746 110 ntBASIC2.55□□□□□ -2
APPP05067 Y_RNA.253-201ENST00000364562 112 ntBASIC2.55□□□□□ -2
APPP05067 RNU6-187P-201ENST00000384139 106 ntBASIC2.55□□□□□ -2
APPP05067 NDUFA4P2-201ENST00000489989 244 ntBASIC2.55□□□□□ -2
APPP05067 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.55□□□□□ -2
APPP05067 AC005786.1-201ENST00000588553 154 ntBASIC2.55□□□□□ -2
APPP05067 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.55□□□□□ -2
APPP05067 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.55□□□□□ -2
APPP05067 ICE2P2-201ENST00000483823 2787 ntBASIC2.55□□□□□ -2
APPP05067 ZNF720P1-201ENST00000562403 1939 ntBASIC2.54□□□□□ -2
APPP05067 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.54□□□□□ -2
APPP05067 RNU6-674P-201ENST00000363831 107 ntBASIC2.54□□□□□ -2
APPP05067 SNORA48.3-201ENST00000391081 134 ntBASIC2.54□□□□□ -2
APPP05067 RNA5SP450-201ENST00000411206 102 ntBASIC2.54□□□□□ -2
APPP05067 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.54□□□□□ -2
APPP05067 SNORD11-201ENST00000459124 84 ntBASIC2.54□□□□□ -2
APPP05067 SNORA31.10-201ENST00000516482 106 ntBASIC2.54□□□□□ -2
APPP05067 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.54□□□□□ -2
APPP05067 AL591926.4-201ENST00000616895 298 ntBASIC2.54□□□□□ -2
APPP05067 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.54□□□□□ -2
APPP05067 Y_RNA.75-201ENST00000362927 97 ntBASIC2.53□□□□□ -2
APPP05067 RNU6-275P-201ENST00000364910 107 ntBASIC2.53□□□□□ -2
APPP05067 RNU6-394P-201ENST00000410735 107 ntBASIC2.53□□□□□ -2
APPP05067 MLLT10P1-201ENST00000418346 262 ntBASIC2.53□□□□□ -2
APPP05067 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.53□□□□□ -2
APPP05067 RNU6-341P-201ENST00000516973 96 ntBASIC2.53□□□□□ -2
APPP05067 RNA5SP437-201ENST00000517249 129 ntBASIC2.53□□□□□ -2
APPP05067 MIR3144-201ENST00000579460 79 ntBASIC2.53□□□□□ -2
APPP05067 MIR3658-201ENST00000636291 56 ntBASIC2.53□□□□□ -2
APPP05067 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
APPP05067 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
APPP05067 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
APPP05067 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
APPP05067 RNA5SP276-201ENST00000362580 94 ntBASIC2.52□□□□□ -2.01
APPP05067 MIR520G-201ENST00000385064 90 ntBASIC2.52□□□□□ -2.01
APPP05067 RN7SKP101-201ENST00000411376 320 ntBASIC2.52□□□□□ -2.01
APPP05067 AC245047.3-201ENST00000429428 127 ntBASIC2.52□□□□□ -2.01
APPP05067 AL121914.1-201ENST00000450188 156 ntBASIC2.52□□□□□ -2.01
APPP05067 SNRPGP8-201ENST00000454064 226 ntBASIC2.52□□□□□ -2.01
APPP05067 RNA5SP364-201ENST00000516938 78 ntBASIC2.52□□□□□ -2.01
APPP05067 MIR3133-201ENST00000583157 78 ntBASIC2.52□□□□□ -2.01
APPP05067 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.52□□□□□ -2.01
APPP05067 MIR219B-201ENST00000637023 88 ntBASIC2.52□□□□□ -2.01
APPP05067 ZNF702P-202ENST00000434269 1966 ntBASIC2.52□□□□□ -2.01
APPP05067 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
APPP05067 Y_RNA.121-201ENST00000363309 113 ntBASIC2.51□□□□□ -2.01
APPP05067 RNY1P11-201ENST00000363759 113 ntBASIC2.51□□□□□ -2.01
APPP05067 SNORD45.3-201ENST00000363836 72 ntBASIC2.51□□□□□ -2.01
APPP05067 RNU6-1336P-201ENST00000383886 109 ntBASIC2.51□□□□□ -2.01
APPP05067 AC104435.1-201ENST00000483483 166 ntBASIC2.51□□□□□ -2.01
APPP05067 RNU6-1116P-201ENST00000517269 99 ntBASIC2.51□□□□□ -2.01
APPP05067 uc_338.20-201ENST00000621563 178 ntBASIC2.51□□□□□ -2.01
APPP05067 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APPP05067 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APPP05067 Y_RNA.272-201ENST00000364696 102 ntBASIC2.5□□□□□ -2.01
APPP05067 SNORD116-18-201ENST00000383961 92 ntBASIC2.5□□□□□ -2.01
APPP05067 Y_RNA.506-201ENST00000384494 102 ntBASIC2.5□□□□□ -2.01
APPP05067 RNU6-125P-201ENST00000384505 107 ntBASIC2.5□□□□□ -2.01
APPP05067 MIR15B-201ENST00000385045 98 ntBASIC2.5□□□□□ -2.01
APPP05067 SNORD72-201ENST00000390994 80 ntBASIC2.5□□□□□ -2.01
APPP05067 AL158823.1-201ENST00000418441 478 ntBASIC2.5□□□□□ -2.01
APPP05067 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.5□□□□□ -2.01
APPP05067 SNRPGP10-201ENST00000432323 225 ntBASIC2.5□□□□□ -2.01
APPP05067 RPL23AP63-201ENST00000498752 471 ntBASIC2.5□□□□□ -2.01
APPP05067 AC069114.2-201ENST00000604699 304 ntBASIC2.5□□□□□ -2.01
APPP05067 AL391903.3-201ENST00000612158 163 ntBASIC2.5□□□□□ -2.01
APPP05067 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
APPP05067 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
APPP05067 MIR126-201ENST00000362291 85 ntBASIC2.49□□□□□ -2.01
APPP05067 Y_RNA.464-201ENST00000384282 110 ntBASIC2.49□□□□□ -2.01
APPP05067 SNORA40.19-201ENST00000390846 128 ntBASIC2.49□□□□□ -2.01
APPP05067 AC006461.1-201ENST00000412637 326 ntBASIC2.49□□□□□ -2.01
APPP05067 RNA5SP272-201ENST00000516095 111 ntBASIC2.49□□□□□ -2.01
APPP05067 AC024995.1-201ENST00000523014 93 ntBASIC2.49□□□□□ -2.01
APPP05067 Y_RNA.783-201ENST00000613546 102 ntBASIC2.49□□□□□ -2.01
APPP05067 MIR8054-201ENST00000620877 86 ntBASIC2.49□□□□□ -2.01
APPP05067 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.49□□□□□ -2.01
APPP05067 AP000553.5-201ENST00000641933 54 ntBASIC2.49□□□□□ -2.01
APPP05067 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
APPP05067 Y_RNA.91-201ENST00000363042 107 ntBASIC2.48□□□□□ -2.01
APPP05067 SNORD68-201ENST00000363214 84 ntBASIC2.48□□□□□ -2.01
APPP05067 RNU6-103P-201ENST00000363686 107 ntBASIC2.48□□□□□ -2.01
APPP05067 Y_RNA.441-201ENST00000384123 112 ntBASIC2.48□□□□□ -2.01
APPP05067 RNU6-296P-201ENST00000384608 107 ntBASIC2.48□□□□□ -2.01
APPP05067 SNORA48.1-201ENST00000390879 135 ntBASIC2.48□□□□□ -2.01
APPP05067 AL049830.1-201ENST00000468034 425 ntBASIC2.48□□□□□ -2.01
APPP05067 AC055731.1-201ENST00000474387 401 ntBASIC2.48□□□□□ -2.01
APPP05067 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.48□□□□□ -2.01
APPP05067 SUB1P4-201ENST00000566062 339 ntBASIC2.48□□□□□ -2.01
APPP05067 AL627230.6-201ENST00000611129 280 ntBASIC2.48□□□□□ -2.01
APPP05067 Y_RNA.23-201ENST00000362496 106 ntBASIC2.47□□□□□ -2.01
APPP05067 RNU4-84P-201ENST00000364200 139 ntBASIC2.47□□□□□ -2.01
APPP05067 RNU6-1019P-201ENST00000364424 107 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms