Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 SEPT14P17-201ENST00000617978 177 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 CASC19-280ENST00000642102 1351 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 MIR409-201ENST00000362237 79 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNU4-79P-201ENST00000362764 141 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 Y_RNA.172-201ENST00000363765 102 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 SNORD50B-201ENST00000364995 70 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 Y_RNA.330-201ENST00000365230 109 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNU6-969P-201ENST00000383900 105 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 MIR526A1-201ENST00000384897 85 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 SNORD89-201ENST00000390981 114 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.37□□□□□ -2.35
COL4A1P02462 RNU2-54P-201ENST00000410299 190 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNU6-1304P-201ENST00000411374 106 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AC018865.2-201ENST00000423631 129 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
COL4A1P02462 AL353997.1-201ENST00000432936 108 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AL162725.1-201ENST00000435405 301 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 MTND1P34-201ENST00000438556 671 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AC104332.1-201ENST00000440471 797 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 U7.7-201ENST00000459276 60 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNU7-21P-201ENST00000459430 62 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AC113410.1-201ENST00000505029 247 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 PRDX4P1-201ENST00000507189 574 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AC114811.1-201ENST00000507207 168 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 Y_RNA.655-201ENST00000515919 96 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNA5SP255-201ENST00000516370 107 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNU6-1012P-201ENST00000516606 109 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNU6-307P-201ENST00000516743 106 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AC004832.4-201ENST00000608952 331 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.37□□□□□ -2.35
COL4A1P02462 RNU6-1188P-201ENST00000363795 107 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AC117470.1-201ENST00000381974 330 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 SNORD116-13-201ENST00000384408 92 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNY3P4-201ENST00000384428 101 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 MIR942-201ENST00000401111 86 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 SNORD99-201ENST00000408612 74 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.37□□□□□ -2.35
COL4A1P02462 AC092423.1-201ENST00000430165 186 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RPEP5-201ENST00000441137 268 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AL392103.1-201ENST00000447000 198 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 FCF1P4-201ENST00000448326 183 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 SNORA70.12-201ENST00000516084 153 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNU2-12P-201ENST00000517216 168 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 AC025627.3-201ENST00000582078 182 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 POLR3GP1-201ENST00000594073 261 ntBASIC0.37□□□□□ -2.35
COL4A1P02462 RNA5SP361-201ENST00000362686 118 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 Y_RNA.124-201ENST00000363339 93 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 SNORD113.3-201ENST00000364630 78 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 Y_RNA.368-201ENST00000365547 113 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 RNU6-1067P-201ENST00000384752 107 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 SNORD111-201ENST00000408139 94 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 MIR548F5-201ENST00000408421 86 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 MIR1185-1-201ENST00000408598 86 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.36□□□□□ -2.35
COL4A1P02462 Y_RNA.714-201ENST00000517065 90 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 AP003716.2-201ENST00000528260 108 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 MIR4764-201ENST00000580680 88 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 AC125232.2-201ENST00000592457 143 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.36□□□□□ -2.35
COL4A1P02462 AC023934.1-201ENST00000574529 2389 ntBASIC0.36□□□□□ -2.35
COL4A1P02462 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
COL4A1P02462 Y_RNA.88-201ENST00000363029 99 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 SNORA25.3-201ENST00000363205 127 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 Y_RNA.361-201ENST00000365515 120 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 RNU6-20P-201ENST00000384106 107 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 SNORD12-201ENST00000391002 90 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 ELOCP24-201ENST00000456370 334 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 RNU6-1096P-201ENST00000517089 102 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 AC022868.1-201ENST00000517767 391 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.35□□□□□ -2.35
COL4A1P02462 AC022441.3-201ENST00000605737 136 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 AL096861.1-201ENST00000610899 123 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.35□□□□□ -2.35
COL4A1P02462 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
COL4A1P02462 AC139792.2-201ENST00000624218 587 ntBASIC0.35□□□□□ -2.35
COL4A1P02462 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
COL4A1P02462 RNA5SP264-201ENST00000363115 107 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 RNU6-801P-201ENST00000364087 105 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 Y_RNA.314-201ENST00000365114 102 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 Y_RNA.336-201ENST00000365307 109 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 Y_RNA.446-201ENST00000384178 104 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.34□□□□□ -2.35
COL4A1P02462 RNU6-1016P-201ENST00000516689 94 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 SNORA18.7-201ENST00000516910 131 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 MTND4LP26-201ENST00000518144 282 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.34□□□□□ -2.35
COL4A1P02462 AC113139.1-201ENST00000605049 239 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 AL591926.4-201ENST00000616895 298 ntBASIC0.34□□□□□ -2.35
COL4A1P02462 snoU2-30.1-201ENST00000365012 70 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.341-201ENST00000365341 102 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.370-201ENST00000365589 108 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 MIR522-201ENST00000385071 87 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 MIR516B2-201ENST00000385190 85 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.605-201ENST00000410577 105 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms