Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AP000533.3-201ENST00000447704 118 ntBASIC-0.94□□□□□ -2.56
TNFP01375 RNU7-55P-201ENST00000459426 62 ntBASIC-0.94□□□□□ -2.56
TNFP01375 RNU6-329P-201ENST00000459618 107 ntBASIC-0.94□□□□□ -2.56
TNFP01375 AC018710.1-201ENST00000506509 158 ntBASIC-0.94□□□□□ -2.56
TNFP01375 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.94□□□□□ -2.56
TNFP01375 RNU6-612P-201ENST00000516909 102 ntBASIC-0.94□□□□□ -2.56
TNFP01375 RNU6-158P-201ENST00000517104 100 ntBASIC-0.94□□□□□ -2.56
TNFP01375 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
TNFP01375 AC024405.2-202ENST00000532731 184 ntBASIC-0.94□□□□□ -2.56
TNFP01375 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.94□□□□□ -2.56
TNFP01375 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.94□□□□□ -2.56
TNFP01375 AC013244.3-201ENST00000605614 388 ntBASIC-0.94□□□□□ -2.56
TNFP01375 AC004223.4-201ENST00000612426 332 ntBASIC-0.94□□□□□ -2.56
TNFP01375 AC022418.1-201ENST00000624118 445 ntBASIC-0.94□□□□□ -2.56
TNFP01375 AP002371.2-201ENST00000624450 503 ntBASIC-0.94□□□□□ -2.56
TNFP01375 AC112487.2-201ENST00000637950 304 ntBASIC-0.94□□□□□ -2.56
TNFP01375 RNU6-227P-201ENST00000362865 103 ntBASIC-0.95□□□□□ -2.56
TNFP01375 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.95□□□□□ -2.56
TNFP01375 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.95□□□□□ -2.56
TNFP01375 SNORA24-201ENST00000384096 131 ntBASIC-0.95□□□□□ -2.56
TNFP01375 RNU6-900P-201ENST00000384498 102 ntBASIC-0.95□□□□□ -2.56
TNFP01375 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.95□□□□□ -2.56
TNFP01375 MIR889-201ENST00000401280 79 ntBASIC-0.95□□□□□ -2.56
TNFP01375 MIR320B2-201ENST00000408479 138 ntBASIC-0.95□□□□□ -2.56
TNFP01375 MTND2P3-201ENST00000452458 470 ntBASIC-0.95□□□□□ -2.56
TNFP01375 AL138752.1-201ENST00000452964 351 ntBASIC-0.95□□□□□ -2.56
TNFP01375 AC022137.1-201ENST00000483735 151 ntBASIC-0.95□□□□□ -2.56
TNFP01375 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.95□□□□□ -2.56
TNFP01375 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.95□□□□□ -2.56
TNFP01375 SNORA27.1-201ENST00000362604 124 ntBASIC-0.96□□□□□ -2.56
TNFP01375 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.96□□□□□ -2.56
TNFP01375 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.96□□□□□ -2.56
TNFP01375 RNU6-266P-201ENST00000364225 107 ntBASIC-0.96□□□□□ -2.56
TNFP01375 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.96□□□□□ -2.56
TNFP01375 RNU6-708P-201ENST00000384217 107 ntBASIC-0.96□□□□□ -2.56
TNFP01375 MIR588-201ENST00000384900 83 ntBASIC-0.96□□□□□ -2.56
TNFP01375 SNORD41.1-201ENST00000391000 69 ntBASIC-0.96□□□□□ -2.56
TNFP01375 SNORD110-201ENST00000408189 75 ntBASIC-0.96□□□□□ -2.56
TNFP01375 AC092447.3-201ENST00000426027 686 ntBASIC-0.96□□□□□ -2.56
TNFP01375 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.96□□□□□ -2.56
TNFP01375 MTCO2P3-201ENST00000442543 421 ntBASIC-0.96□□□□□ -2.56
TNFP01375 MTCO2P29-201ENST00000465212 189 ntBASIC-0.96□□□□□ -2.56
TNFP01375 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.96□□□□□ -2.56
TNFP01375 RNU2-69P-201ENST00000516061 100 ntBASIC-0.96□□□□□ -2.56
TNFP01375 RNU6-479P-201ENST00000516348 105 ntBASIC-0.96□□□□□ -2.56
TNFP01375 RNU6-135P-201ENST00000516769 101 ntBASIC-0.96□□□□□ -2.56
TNFP01375 RNU6-706P-201ENST00000517229 104 ntBASIC-0.96□□□□□ -2.56
TNFP01375 AC091144.1-201ENST00000519573 138 ntBASIC-0.96□□□□□ -2.56
TNFP01375 MIR3165-201ENST00000579874 75 ntBASIC-0.96□□□□□ -2.56
TNFP01375 MIR4791-201ENST00000607666 84 ntBASIC-0.96□□□□□ -2.56
TNFP01375 PART1_1.1-201ENST00000611761 217 ntBASIC-0.96□□□□□ -2.56
TNFP01375 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.97□□□□□ -2.56
TNFP01375 RNU6-727P-201ENST00000363592 107 ntBASIC-0.97□□□□□ -2.56
TNFP01375 SNORA63C-201ENST00000364578 129 ntBASIC-0.97□□□□□ -2.56
TNFP01375 RNU6-702P-201ENST00000364982 107 ntBASIC-0.97□□□□□ -2.56
TNFP01375 SNORD50B-201ENST00000364995 70 ntBASIC-0.97□□□□□ -2.56
TNFP01375 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.97□□□□□ -2.56
TNFP01375 RNU6-407P-201ENST00000365280 104 ntBASIC-0.97□□□□□ -2.56
TNFP01375 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.97□□□□□ -2.56
TNFP01375 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.97□□□□□ -2.56
TNFP01375 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.97□□□□□ -2.56
TNFP01375 RNA5SP266-201ENST00000410273 108 ntBASIC-0.97□□□□□ -2.56
TNFP01375 RNU2-51P-201ENST00000410708 197 ntBASIC-0.97□□□□□ -2.56
TNFP01375 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.97□□□□□ -2.56
TNFP01375 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.97□□□□□ -2.56
TNFP01375 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.97□□□□□ -2.56
TNFP01375 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.97□□□□□ -2.56
TNFP01375 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.97□□□□□ -2.56
TNFP01375 AC091179.3-201ENST00000474761 144 ntBASIC-0.97□□□□□ -2.56
TNFP01375 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.97□□□□□ -2.56
TNFP01375 AC010587.1-201ENST00000505809 469 ntBASIC-0.97□□□□□ -2.56
TNFP01375 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.97□□□□□ -2.56
TNFP01375 MTND2P32-201ENST00000521584 1038 ntBASIC-0.97□□□□□ -2.56
TNFP01375 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.97□□□□□ -2.56
TNFP01375 MIR6082-201ENST00000613604 109 ntBASIC-0.97□□□□□ -2.56
TNFP01375 MIR7844-201ENST00000616161 122 ntBASIC-0.97□□□□□ -2.56
TNFP01375 MIR1246-201ENST00000636535 73 ntBASIC-0.97□□□□□ -2.56
TNFP01375 SNORD115-8-201ENST00000363856 82 ntBASIC-0.98□□□□□ -2.57
TNFP01375 SNORD115-38-201ENST00000365037 82 ntBASIC-0.98□□□□□ -2.57
TNFP01375 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.98□□□□□ -2.57
TNFP01375 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.98□□□□□ -2.57
TNFP01375 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.98□□□□□ -2.57
TNFP01375 RNU6-136P-201ENST00000384663 107 ntBASIC-0.98□□□□□ -2.57
TNFP01375 MIR518B-201ENST00000385127 83 ntBASIC-0.98□□□□□ -2.57
TNFP01375 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.98□□□□□ -2.57
TNFP01375 USMG5P1-201ENST00000425964 177 ntBASIC-0.98□□□□□ -2.57
TNFP01375 snoU13.2-201ENST00000459201 104 ntBASIC-0.98□□□□□ -2.57
TNFP01375 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.98□□□□□ -2.57
TNFP01375 MIR5591-201ENST00000578248 65 ntBASIC-0.98□□□□□ -2.57
TNFP01375 U7.6-201ENST00000610841 64 ntBASIC-0.98□□□□□ -2.57
TNFP01375 AC022306.2-201ENST00000617563 647 ntBASIC-0.98□□□□□ -2.57
TNFP01375 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.99□□□□□ -2.57
TNFP01375 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.99□□□□□ -2.57
TNFP01375 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.99□□□□□ -2.57
TNFP01375 RNU6-831P-201ENST00000384548 107 ntBASIC-0.99□□□□□ -2.57
TNFP01375 RNA5SP118-201ENST00000410385 109 ntBASIC-0.99□□□□□ -2.57
TNFP01375 RNU4-83P-201ENST00000410863 133 ntBASIC-0.99□□□□□ -2.57
TNFP01375 MTND3P8-201ENST00000412909 339 ntBASIC-0.99□□□□□ -2.57
TNFP01375 HLA-S-202ENST00000425174 53 ntBASIC-0.99□□□□□ -2.57
TNFP01375 AC137499.1-201ENST00000427602 88 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms