Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 RNU6-474P-201ENST00000384243 107 ntBASIC1.06□□□□□ -2.24
PGK1P00558 Y_RNA.462-201ENST00000384268 102 ntBASIC1.06□□□□□ -2.24
PGK1P00558 RNU6-937P-201ENST00000384325 106 ntBASIC1.06□□□□□ -2.24
PGK1P00558 Y_RNA.535-201ENST00000384612 99 ntBASIC1.06□□□□□ -2.24
PGK1P00558 MIR562-201ENST00000384894 95 ntBASIC1.06□□□□□ -2.24
PGK1P00558 RNU11-5P-201ENST00000391216 129 ntBASIC1.06□□□□□ -2.24
PGK1P00558 RNA5SP482-201ENST00000391269 118 ntBASIC1.06□□□□□ -2.24
PGK1P00558 AL590004.1-201ENST00000405321 300 ntBASIC1.06□□□□□ -2.24
PGK1P00558 MIR1302-11-201ENST00000408051 138 ntBASIC1.06□□□□□ -2.24
PGK1P00558 MIR1302-9-201ENST00000408365 138 ntBASIC1.06□□□□□ -2.24
PGK1P00558 MIR1302-10-201ENST00000408734 138 ntBASIC1.06□□□□□ -2.24
PGK1P00558 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
PGK1P00558 RPS20P10-201ENST00000451209 253 ntBASIC1.06□□□□□ -2.24
PGK1P00558 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
PGK1P00558 AC233266.1-201ENST00000454518 96 ntBASIC1.06□□□□□ -2.24
PGK1P00558 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.06□□□□□ -2.24
PGK1P00558 RNU6-1170P-201ENST00000515974 106 ntBASIC1.06□□□□□ -2.24
PGK1P00558 RNU6-922P-201ENST00000516753 99 ntBASIC1.06□□□□□ -2.24
PGK1P00558 RNU7-28P-201ENST00000516759 62 ntBASIC1.06□□□□□ -2.24
PGK1P00558 RNU6-1116P-201ENST00000517269 99 ntBASIC1.06□□□□□ -2.24
PGK1P00558 DEFB117-201ENST00000602356 141 ntBASIC1.06□□□□□ -2.24
PGK1P00558 MIR1302-2-201ENST00000607096 138 ntBASIC1.06□□□□□ -2.24
PGK1P00558 AC242852.1-201ENST00000612151 96 ntBASIC1.06□□□□□ -2.24
PGK1P00558 AC090971.5-201ENST00000621102 293 ntBASIC1.06□□□□□ -2.24
PGK1P00558 AC244015.1-201ENST00000622301 99 ntBASIC1.06□□□□□ -2.24
PGK1P00558 Y_RNA.61-201ENST00000362835 102 ntBASIC1.05□□□□□ -2.24
PGK1P00558 Y_RNA.138-201ENST00000363462 102 ntBASIC1.05□□□□□ -2.24
PGK1P00558 RNU4-76P-201ENST00000364509 141 ntBASIC1.05□□□□□ -2.24
PGK1P00558 Y_RNA.331-201ENST00000365267 102 ntBASIC1.05□□□□□ -2.24
PGK1P00558 Y_RNA.445-201ENST00000384168 102 ntBASIC1.05□□□□□ -2.24
PGK1P00558 Y_RNA.471-201ENST00000384312 102 ntBASIC1.05□□□□□ -2.24
PGK1P00558 RNY1P4-201ENST00000384595 115 ntBASIC1.05□□□□□ -2.24
PGK1P00558 Y_RNA.551-201ENST00000384661 102 ntBASIC1.05□□□□□ -2.24
PGK1P00558 MIR653-201ENST00000385279 96 ntBASIC1.05□□□□□ -2.24
PGK1P00558 RNU4-30P-201ENST00000410245 143 ntBASIC1.05□□□□□ -2.24
PGK1P00558 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.05□□□□□ -2.24
PGK1P00558 MIR3145-201ENST00000580727 82 ntBASIC1.05□□□□□ -2.24
PGK1P00558 Y_RNA.772-201ENST00000606692 102 ntBASIC1.05□□□□□ -2.24
PGK1P00558 AL591926.4-201ENST00000616895 298 ntBASIC1.05□□□□□ -2.24
PGK1P00558 AC068647.2-201ENST00000637380 353 ntBASIC1.05□□□□□ -2.24
PGK1P00558 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.05□□□□□ -2.24
PGK1P00558 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PGK1P00558 RNU6-199P-201ENST00000362954 107 ntBASIC1.04□□□□□ -2.24
PGK1P00558 U8.5-201ENST00000364528 136 ntBASIC1.04□□□□□ -2.24
PGK1P00558 Y_RNA.286-201ENST00000364813 102 ntBASIC1.04□□□□□ -2.24
PGK1P00558 Y_RNA.310-201ENST00000365063 113 ntBASIC1.04□□□□□ -2.24
PGK1P00558 Y_RNA.431-201ENST00000384086 102 ntBASIC1.04□□□□□ -2.24
PGK1P00558 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
PGK1P00558 MIR526A1-201ENST00000384897 85 ntBASIC1.04□□□□□ -2.24
PGK1P00558 Y_RNA.604-201ENST00000410574 102 ntBASIC1.04□□□□□ -2.24
PGK1P00558 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
PGK1P00558 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.04□□□□□ -2.24
PGK1P00558 DYNLT3P2-201ENST00000442517 295 ntBASIC1.04□□□□□ -2.24
PGK1P00558 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
PGK1P00558 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
PGK1P00558 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
PGK1P00558 RN7SL793P-201ENST00000583259 296 ntBASIC1.04□□□□□ -2.24
PGK1P00558 RPS29P30-201ENST00000600975 111 ntBASIC1.04□□□□□ -2.24
PGK1P00558 RAC1P9-201ENST00000604990 392 ntBASIC1.04□□□□□ -2.24
PGK1P00558 AL020996.3-201ENST00000606617 222 ntBASIC1.04□□□□□ -2.24
PGK1P00558 Y_RNA.143-201ENST00000363520 106 ntBASIC1.03□□□□□ -2.24
PGK1P00558 RNU4-50P-201ENST00000364361 141 ntBASIC1.03□□□□□ -2.24
PGK1P00558 Y_RNA.253-201ENST00000364562 112 ntBASIC1.03□□□□□ -2.24
PGK1P00558 RNU6-450P-201ENST00000364654 107 ntBASIC1.03□□□□□ -2.24
PGK1P00558 SNORD14.1-201ENST00000365609 90 ntBASIC1.03□□□□□ -2.24
PGK1P00558 SNORD63-201ENST00000384262 68 ntBASIC1.03□□□□□ -2.24
PGK1P00558 SNORA25-201ENST00000384384 134 ntBASIC1.03□□□□□ -2.24
PGK1P00558 RNU6-102P-201ENST00000384485 104 ntBASIC1.03□□□□□ -2.24
PGK1P00558 MIR216A-201ENST00000385063 110 ntBASIC1.03□□□□□ -2.24
PGK1P00558 RNU6-855P-201ENST00000410395 104 ntBASIC1.03□□□□□ -2.24
PGK1P00558 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.03□□□□□ -2.24
PGK1P00558 U8.20-201ENST00000459445 131 ntBASIC1.03□□□□□ -2.24
PGK1P00558 RNU6-1046P-201ENST00000516538 107 ntBASIC1.03□□□□□ -2.24
PGK1P00558 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.03□□□□□ -2.24
PGK1P00558 MIR4762-201ENST00000585261 75 ntBASIC1.03□□□□□ -2.24
PGK1P00558 AC120024.3-201ENST00000603167 156 ntBASIC1.03□□□□□ -2.24
PGK1P00558 AC104695.3-201ENST00000604052 296 ntBASIC1.03□□□□□ -2.24
PGK1P00558 BX284668.6-201ENST00000606899 438 ntBASIC1.03□□□□□ -2.24
PGK1P00558 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
PGK1P00558 Y_RNA.368-201ENST00000365547 113 ntBASIC1.02□□□□□ -2.25
PGK1P00558 Y_RNA.439-201ENST00000384119 94 ntBASIC1.02□□□□□ -2.25
PGK1P00558 Y_RNA.526-201ENST00000384572 110 ntBASIC1.02□□□□□ -2.25
PGK1P00558 PIGPP3-201ENST00000425307 415 ntBASIC1.02□□□□□ -2.25
PGK1P00558 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
PGK1P00558 RNU7-110P-201ENST00000516891 62 ntBASIC1.02□□□□□ -2.25
PGK1P00558 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
PGK1P00558 AC011373.1-201ENST00000607270 237 ntBASIC1.02□□□□□ -2.25
PGK1P00558 Y_RNA.105-201ENST00000363182 111 ntBASIC1.01□□□□□ -2.25
PGK1P00558 Y_RNA.216-201ENST00000364205 93 ntBASIC1.01□□□□□ -2.25
PGK1P00558 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
PGK1P00558 Y_RNA.460-201ENST00000384255 102 ntBASIC1.01□□□□□ -2.25
PGK1P00558 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
PGK1P00558 RNU6-823P-201ENST00000391042 103 ntBASIC1.01□□□□□ -2.25
PGK1P00558 AL390729.2-201ENST00000416137 156 ntBASIC1.01□□□□□ -2.25
PGK1P00558 Y_RNA.631-201ENST00000459607 101 ntBASIC1.01□□□□□ -2.25
PGK1P00558 CYCTP-201ENST00000504253 315 ntBASIC1.01□□□□□ -2.25
PGK1P00558 RNU7-12P-201ENST00000516030 62 ntBASIC1.01□□□□□ -2.25
PGK1P00558 Y_RNA.711-201ENST00000516993 102 ntBASIC1.01□□□□□ -2.25
PGK1P00558 Y_RNA.715-201ENST00000517082 110 ntBASIC1.01□□□□□ -2.25
PGK1P00558 DEFB108E-201ENST00000524692 240 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms