Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
MBD4O95243 RNU6-1084P-201ENST00000362498 107 ntBASIC1.35□□□□□ -2.19
MBD4O95243 RNU5E-4P-201ENST00000364931 120 ntBASIC1.35□□□□□ -2.19
MBD4O95243 SNORA70.7-201ENST00000384159 133 ntBASIC1.35□□□□□ -2.19
MBD4O95243 Y_RNA.460-201ENST00000384255 102 ntBASIC1.35□□□□□ -2.19
MBD4O95243 MIR15B-201ENST00000385045 98 ntBASIC1.35□□□□□ -2.19
MBD4O95243 AL590004.1-201ENST00000405321 300 ntBASIC1.35□□□□□ -2.19
MBD4O95243 MLLT10P1-201ENST00000418346 262 ntBASIC1.35□□□□□ -2.19
MBD4O95243 POLR2KP2-201ENST00000438155 177 ntBASIC1.35□□□□□ -2.19
MBD4O95243 COX6CP14-201ENST00000469580 174 ntBASIC1.35□□□□□ -2.19
MBD4O95243 SNORD111.1-201ENST00000516421 86 ntBASIC1.35□□□□□ -2.19
MBD4O95243 C8orf59P2-201ENST00000603441 271 ntBASIC1.35□□□□□ -2.19
MBD4O95243 PART1_1.1-201ENST00000611761 217 ntBASIC1.35□□□□□ -2.19
MBD4O95243 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.35□□□□□ -2.19
MBD4O95243 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
MBD4O95243 AC090574.1-201ENST00000623186 233 ntBASIC1.35□□□□□ -2.19
MBD4O95243 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.35□□□□□ -2.19
MBD4O95243 RNU6-867P-201ENST00000364956 107 ntBASIC1.34□□□□□ -2.19
MBD4O95243 MIR1298-201ENST00000408783 112 ntBASIC1.34□□□□□ -2.19
MBD4O95243 RNU6-130P-201ENST00000411112 103 ntBASIC1.34□□□□□ -2.19
MBD4O95243 SNRPGP10-201ENST00000432323 225 ntBASIC1.34□□□□□ -2.19
MBD4O95243 AC048334.1-201ENST00000477975 159 ntBASIC1.34□□□□□ -2.19
MBD4O95243 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.34□□□□□ -2.19
MBD4O95243 SNORD116-28-201ENST00000516123 91 ntBASIC1.34□□□□□ -2.19
MBD4O95243 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.34□□□□□ -2.19
MBD4O95243 Y_RNA.383-201ENST00000383855 97 ntBASIC1.33□□□□□ -2.2
MBD4O95243 RNU6-910P-201ENST00000390844 107 ntBASIC1.33□□□□□ -2.2
MBD4O95243 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
MBD4O95243 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.33□□□□□ -2.2
MBD4O95243 AL591704.2-201ENST00000421658 181 ntBASIC1.33□□□□□ -2.2
MBD4O95243 SNORD45.4-201ENST00000516629 73 ntBASIC1.33□□□□□ -2.2
MBD4O95243 RNA5SP404-201ENST00000517118 132 ntBASIC1.33□□□□□ -2.2
MBD4O95243 AC024405.2-202ENST00000532731 184 ntBASIC1.33□□□□□ -2.2
MBD4O95243 AC127455.1-201ENST00000565496 145 ntBASIC1.33□□□□□ -2.2
MBD4O95243 AC124312.5-201ENST00000604451 268 ntBASIC1.33□□□□□ -2.2
MBD4O95243 AC007742.2-201ENST00000618226 398 ntBASIC1.33□□□□□ -2.2
MBD4O95243 AC117470.1-201ENST00000381974 330 ntBASIC1.32□□□□□ -2.2
MBD4O95243 MIR136-201ENST00000385207 82 ntBASIC1.32□□□□□ -2.2
MBD4O95243 RNU6-308P-201ENST00000390957 107 ntBASIC1.32□□□□□ -2.2
MBD4O95243 RPL23AP54-201ENST00000495129 419 ntBASIC1.32□□□□□ -2.2
MBD4O95243 RNU7-115P-201ENST00000516433 55 ntBASIC1.32□□□□□ -2.2
MBD4O95243 RNA5SP102-201ENST00000516865 106 ntBASIC1.32□□□□□ -2.2
MBD4O95243 Y_RNA.715-201ENST00000517082 110 ntBASIC1.32□□□□□ -2.2
MBD4O95243 Y_RNA.721-201ENST00000517207 102 ntBASIC1.32□□□□□ -2.2
MBD4O95243 MIR3145-201ENST00000580727 82 ntBASIC1.32□□□□□ -2.2
MBD4O95243 AC087685.1-201ENST00000587507 141 ntBASIC1.32□□□□□ -2.2
MBD4O95243 JPX_2.1-201ENST00000614161 69 ntBASIC1.32□□□□□ -2.2
MBD4O95243 MIR548AY-201ENST00000617669 107 ntBASIC1.32□□□□□ -2.2
MBD4O95243 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MBD4O95243 Y_RNA.28-201ENST00000362554 111 ntBASIC1.31□□□□□ -2.2
MBD4O95243 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
MBD4O95243 Y_RNA.203-201ENST00000364106 102 ntBASIC1.31□□□□□ -2.2
MBD4O95243 Y_RNA.238-201ENST00000364441 102 ntBASIC1.31□□□□□ -2.2
MBD4O95243 PMCHL1-202ENST00000423102 261 ntBASIC1.31□□□□□ -2.2
MBD4O95243 Y_RNA.631-201ENST00000459607 101 ntBASIC1.31□□□□□ -2.2
MBD4O95243 RNU6-988P-201ENST00000519081 107 ntBASIC1.31□□□□□ -2.2
MBD4O95243 AC136932.1-201ENST00000574771 208 ntBASIC1.31□□□□□ -2.2
MBD4O95243 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
MBD4O95243 MIR376A1-201ENST00000616574 68 ntBASIC1.31□□□□□ -2.2
MBD4O95243 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
MBD4O95243 Y_RNA.31-201ENST00000362574 102 ntBASIC1.3□□□□□ -2.2
MBD4O95243 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
MBD4O95243 Y_RNA.183-201ENST00000363882 113 ntBASIC1.3□□□□□ -2.2
MBD4O95243 Y_RNA.813-201ENST00000364639 102 ntBASIC1.3□□□□□ -2.2
MBD4O95243 RNU6-101P-201ENST00000410323 104 ntBASIC1.3□□□□□ -2.2
MBD4O95243 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
MBD4O95243 AC117454.1-201ENST00000491120 168 ntBASIC1.3□□□□□ -2.2
MBD4O95243 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MBD4O95243 MIR96-201ENST00000362288 78 ntBASIC1.29□□□□□ -2.2
MBD4O95243 Y_RNA.148-201ENST00000363557 117 ntBASIC1.29□□□□□ -2.2
MBD4O95243 RNU6-823P-201ENST00000391042 103 ntBASIC1.29□□□□□ -2.2
MBD4O95243 Y_RNA.645-201ENST00000391229 102 ntBASIC1.29□□□□□ -2.2
MBD4O95243 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
MBD4O95243 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
MBD4O95243 AC136628.3-201ENST00000521868 290 ntBASIC1.29□□□□□ -2.2
MBD4O95243 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.29□□□□□ -2.2
MBD4O95243 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.29□□□□□ -2.2
MBD4O95243 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
MBD4O95243 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
MBD4O95243 RNU4-80P-201ENST00000363200 141 ntBASIC1.28□□□□□ -2.2
MBD4O95243 Y_RNA.128-201ENST00000363391 112 ntBASIC1.28□□□□□ -2.2
MBD4O95243 SNORD113-8-201ENST00000363497 74 ntBASIC1.28□□□□□ -2.2
MBD4O95243 SNORD14E-201ENST00000364009 85 ntBASIC1.28□□□□□ -2.2
MBD4O95243 U8.7-201ENST00000364940 136 ntBASIC1.28□□□□□ -2.2
MBD4O95243 SNORD50B-201ENST00000364995 70 ntBASIC1.28□□□□□ -2.2
MBD4O95243 RNU6-969P-201ENST00000383900 105 ntBASIC1.28□□□□□ -2.2
MBD4O95243 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
MBD4O95243 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
MBD4O95243 MIR516B2-201ENST00000385190 85 ntBASIC1.28□□□□□ -2.2
MBD4O95243 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.28□□□□□ -2.2
MBD4O95243 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
MBD4O95243 MIR1252-201ENST00000408861 65 ntBASIC1.28□□□□□ -2.2
MBD4O95243 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
MBD4O95243 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.28□□□□□ -2.2
MBD4O95243 SNORD79.1-201ENST00000516069 84 ntBASIC1.28□□□□□ -2.2
MBD4O95243 RNU6-1046P-201ENST00000516538 107 ntBASIC1.28□□□□□ -2.2
MBD4O95243 AC090142.3-201ENST00000519012 385 ntBASIC1.28□□□□□ -2.2
MBD4O95243 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.28□□□□□ -2.2
MBD4O95243 MIR4300-201ENST00000581016 96 ntBASIC1.28□□□□□ -2.2
MBD4O95243 MIR2681-201ENST00000581814 105 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 247.9 ms