Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SNORD116-7-201ENST00000384404 95 ntBASIC0.07□□□□□ -2.4
SNX4O95219 SNORD116-5-201ENST00000384462 95 ntBASIC0.07□□□□□ -2.4
SNX4O95219 Y_RNA.537-201ENST00000384626 109 ntBASIC0.07□□□□□ -2.4
SNX4O95219 RNU2-61P-201ENST00000411069 191 ntBASIC0.07□□□□□ -2.4
SNX4O95219 SNORD83.1-201ENST00000411362 77 ntBASIC0.07□□□□□ -2.4
SNX4O95219 NDUFA4P2-201ENST00000489989 244 ntBASIC0.07□□□□□ -2.4
SNX4O95219 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.07□□□□□ -2.4
SNX4O95219 RNU6-408P-201ENST00000515910 100 ntBASIC0.07□□□□□ -2.4
SNX4O95219 AP003327.1-201ENST00000529684 127 ntBASIC0.07□□□□□ -2.4
SNX4O95219 AC018462.2-201ENST00000605375 395 ntBASIC0.07□□□□□ -2.4
SNX4O95219 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
SNX4O95219 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.06□□□□□ -2.4
SNX4O95219 CHEK2P4-201ENST00000450340 246 ntBASIC0.06□□□□□ -2.4
SNX4O95219 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.06□□□□□ -2.4
SNX4O95219 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
SNX4O95219 Pinc.1-201ENST00000616452 154 ntBASIC0.06□□□□□ -2.4
SNX4O95219 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
SNX4O95219 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
SNX4O95219 Y_RNA.2-201ENST00000362330 96 ntBASIC0.05□□□□□ -2.4
SNX4O95219 RNU6-1301P-201ENST00000362724 104 ntBASIC0.05□□□□□ -2.4
SNX4O95219 Y_RNA.258-201ENST00000364613 105 ntBASIC0.05□□□□□ -2.4
SNX4O95219 RNU6-442P-201ENST00000383968 104 ntBASIC0.05□□□□□ -2.4
SNX4O95219 MIR802-201ENST00000390235 94 ntBASIC0.05□□□□□ -2.4
SNX4O95219 RNU6-679P-201ENST00000391003 106 ntBASIC0.05□□□□□ -2.4
SNX4O95219 RNA5SP63-201ENST00000391225 112 ntBASIC0.05□□□□□ -2.4
SNX4O95219 MTND3P21-201ENST00000433774 331 ntBASIC0.05□□□□□ -2.4
SNX4O95219 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.05□□□□□ -2.4
SNX4O95219 SCARNA8-201ENST00000515924 131 ntBASIC0.05□□□□□ -2.4
SNX4O95219 RNA5SP330-201ENST00000517096 96 ntBASIC0.05□□□□□ -2.4
SNX4O95219 AC109635.3-201ENST00000529536 185 ntBASIC0.05□□□□□ -2.4
SNX4O95219 MIR4771-2-201ENST00000577758 74 ntBASIC0.05□□□□□ -2.4
SNX4O95219 MIR4790-201ENST00000577799 79 ntBASIC0.05□□□□□ -2.4
SNX4O95219 MIR548AO-201ENST00000579992 96 ntBASIC0.05□□□□□ -2.4
SNX4O95219 MIR4804-201ENST00000581683 73 ntBASIC0.05□□□□□ -2.4
SNX4O95219 MIR4771-1-201ENST00000582617 74 ntBASIC0.05□□□□□ -2.4
SNX4O95219 MIR4264-201ENST00000583520 66 ntBASIC0.05□□□□□ -2.4
SNX4O95219 RNU6-593P-201ENST00000364716 112 ntBASIC0.04□□□□□ -2.4
SNX4O95219 SNORA1.2-201ENST00000365189 134 ntBASIC0.04□□□□□ -2.4
SNX4O95219 RNU6-831P-201ENST00000384548 107 ntBASIC0.04□□□□□ -2.4
SNX4O95219 MIR7-2-201ENST00000384970 110 ntBASIC0.04□□□□□ -2.4
SNX4O95219 U8.17-201ENST00000391292 132 ntBASIC0.04□□□□□ -2.4
SNX4O95219 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.04□□□□□ -2.4
SNX4O95219 RNU6-192P-201ENST00000391253 100 ntBASIC0.03□□□□□ -2.4
SNX4O95219 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
SNX4O95219 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.03□□□□□ -2.4
SNX4O95219 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.03□□□□□ -2.4
SNX4O95219 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
SNX4O95219 RNA5SP517-201ENST00000364724 117 ntBASIC0.02□□□□□ -2.41
SNX4O95219 MIR570-201ENST00000384917 97 ntBASIC0.02□□□□□ -2.41
SNX4O95219 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
SNX4O95219 MTCO2P33-201ENST00000402100 465 ntBASIC0.02□□□□□ -2.41
SNX4O95219 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.02□□□□□ -2.41
SNX4O95219 MIR1197-201ENST00000408818 88 ntBASIC0.02□□□□□ -2.41
SNX4O95219 AL353997.1-201ENST00000432936 108 ntBASIC0.02□□□□□ -2.41
SNX4O95219 snoU13.21-201ENST00000459368 105 ntBASIC0.02□□□□□ -2.41
SNX4O95219 AC026782.1-201ENST00000512952 449 ntBASIC0.02□□□□□ -2.41
SNX4O95219 RNU6-1016P-201ENST00000516689 94 ntBASIC0.02□□□□□ -2.41
SNX4O95219 MIR4676-201ENST00000583078 72 ntBASIC0.02□□□□□ -2.41
SNX4O95219 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
SNX4O95219 uc_338.4-201ENST00000616635 176 ntBASIC0.02□□□□□ -2.41
SNX4O95219 Y_RNA.157-201ENST00000363638 102 ntBASIC0.01□□□□□ -2.41
SNX4O95219 RNU6-324P-201ENST00000363957 106 ntBASIC0.01□□□□□ -2.41
SNX4O95219 RNU6-716P-201ENST00000365621 103 ntBASIC0.01□□□□□ -2.41
SNX4O95219 RNA5SP118-201ENST00000410385 109 ntBASIC0.01□□□□□ -2.41
SNX4O95219 RNU2-16P-201ENST00000410712 136 ntBASIC0.01□□□□□ -2.41
SNX4O95219 RNU7-116P-201ENST00000516940 62 ntBASIC0.01□□□□□ -2.41
SNX4O95219 EIF1P4-201ENST00000572664 335 ntBASIC0.01□□□□□ -2.41
SNX4O95219 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
SNX4O95219 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
SNX4O95219 JPX_2.1-201ENST00000614161 69 ntBASIC0.01□□□□□ -2.41
SNX4O95219 RNA5SP457-201ENST00000363657 124 ntBASIC0□□□□□ -2.41
SNX4O95219 Y_RNA.172-201ENST00000363765 102 ntBASIC0□□□□□ -2.41
SNX4O95219 SNORD45.3-201ENST00000363836 72 ntBASIC0□□□□□ -2.41
SNX4O95219 RNU6-205P-201ENST00000390858 107 ntBASIC0□□□□□ -2.41
SNX4O95219 AC073261.1-201ENST00000429409 121 ntBASIC0□□□□□ -2.41
SNX4O95219 RNU7-56P-201ENST00000458744 62 ntBASIC0□□□□□ -2.41
SNX4O95219 AC069113.3-201ENST00000521019 150 ntBASIC0□□□□□ -2.41
SNX4O95219 MTND3P12-201ENST00000559068 328 ntBASIC0□□□□□ -2.41
SNX4O95219 AC005899.2-201ENST00000584353 90 ntBASIC0□□□□□ -2.41
SNX4O95219 MTND1P7-201ENST00000632801 297 ntBASIC0□□□□□ -2.41
SNX4O95219 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0□□□□□ -2.41
SNX4O95219 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 RNU6-847P-201ENST00000411115 108 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.01□□□□□ -2.41
SNX4O95219 HMGN1P10-201ENST00000474557 553 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 MTND5P5-201ENST00000503764 376 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.01□□□□□ -2.41
SNX4O95219 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 RNU6-307P-201ENST00000516743 106 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.01□□□□□ -2.41
SNX4O95219 AC018638.8-201ENST00000588755 281 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 MIR4791-201ENST00000607666 84 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 AC078938.1-201ENST00000620993 318 ntBASIC-0.01□□□□□ -2.41
SNX4O95219 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
SNX4O95219 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.02□□□□□ -2.41
SNX4O95219 RNU6-961P-201ENST00000363893 105 ntBASIC-0.02□□□□□ -2.41
SNX4O95219 SNORA63C-201ENST00000364578 129 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms