Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.19□□□□□ -2.38
UPK1BO75841 AC005899.2-201ENST00000584353 90 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 AC243829.6-201ENST00000612652 106 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 Pinc.1-201ENST00000616452 154 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 AC048344.4-201ENST00000619744 527 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 AC027514.1-201ENST00000588561 1603 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 Y_RNA.86-201ENST00000363020 111 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 Y_RNA.88-201ENST00000363029 99 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 RNU6-626P-201ENST00000363354 107 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 Y_RNA.482-201ENST00000384377 111 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 SNORA51.10-201ENST00000384418 136 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 MIR216A-201ENST00000385063 110 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 SNORA69.1-201ENST00000390904 137 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 RNU6-679P-201ENST00000391003 106 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 SNORD115-47-201ENST00000391226 86 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 SNORA75.4-201ENST00000391278 119 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 U8.17-201ENST00000391292 132 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 Y_RNA.592-201ENST00000410274 109 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 FCF1P4-201ENST00000448326 183 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 U8.19-201ENST00000459095 133 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 AC092989.1-201ENST00000481235 277 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.18□□□□□ -2.38
UPK1BO75841 MIR4771-2-201ENST00000577758 74 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 MIR4771-1-201ENST00000582617 74 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 MIR151B-201ENST00000584249 96 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 AC011476.5-201ENST00000615594 130 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 MTND1P7-201ENST00000632801 297 ntBASIC0.18□□□□□ -2.38
UPK1BO75841 AC090625.1-201ENST00000357130 210 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 Y_RNA.329-201ENST00000365209 107 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 Y_RNA.339-201ENST00000365325 102 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 Y_RNA.370-201ENST00000365589 108 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 Y_RNA.376-201ENST00000365638 108 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 RNU6-510P-201ENST00000391239 108 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 RNU6-855P-201ENST00000410395 104 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 RNU6-496P-201ENST00000516145 99 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 MIR4791-201ENST00000607666 84 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 MIR8070-201ENST00000616510 88 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 AC092634.7-201ENST00000621022 103 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 MIR6513-201ENST00000621188 64 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 AC243829.3-201ENST00000622177 108 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 MIR3688-2-201ENST00000636963 87 ntBASIC0.17□□□□□ -2.38
UPK1BO75841 Y_RNA.72-201ENST00000362894 103 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 Y_RNA.146-201ENST00000363549 102 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 Y_RNA.203-201ENST00000364106 102 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 RNY3P11-201ENST00000364153 102 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 RNU4-24P-201ENST00000364565 139 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 RNU6-580P-201ENST00000365159 107 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 RNU6-442P-201ENST00000383968 104 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 RNU6-125P-201ENST00000384505 107 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 MIR802-201ENST00000390235 94 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
UPK1BO75841 MTCO2P33-201ENST00000402100 465 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 MTND3P8-201ENST00000412909 339 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 SNRPGP14-201ENST00000435400 219 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 RNU7-169P-201ENST00000459456 61 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.16□□□□□ -2.38
UPK1BO75841 POLR3GP1-201ENST00000594073 261 ntBASIC0.16□□□□□ -2.38
UPK1BO75841 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.16□□□□□ -2.38
UPK1BO75841 RNU6-268P-201ENST00000364174 107 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 SNORA25.9-201ENST00000365087 128 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 RNU6-1156P-201ENST00000410365 100 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.15□□□□□ -2.39
UPK1BO75841 RNU6-470P-201ENST00000515954 104 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 SNORA25.12-201ENST00000516202 82 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 RNU6-830P-201ENST00000516353 107 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 RNU6-307P-201ENST00000516743 106 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 MIR4804-201ENST00000581683 73 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 LARP7P1-201ENST00000605576 316 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 JPX_2.1-201ENST00000614161 69 ntBASIC0.15□□□□□ -2.39
UPK1BO75841 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 SNORD44.1-201ENST00000363202 61 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 RNU6-1209P-201ENST00000363655 107 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 RNA5SP517-201ENST00000364724 117 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 VTRNA1-3-201ENST00000365645 89 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 RNU6-1323P-201ENST00000384025 107 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 Y_RNA.537-201ENST00000384626 109 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 MIR625-201ENST00000385047 85 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.14□□□□□ -2.39
UPK1BO75841 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.14□□□□□ -2.39
UPK1BO75841 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.14□□□□□ -2.39
UPK1BO75841 AC116353.2-201ENST00000505332 712 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
UPK1BO75841 AP000753.3-201ENST00000604083 169 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 RBM11P1-201ENST00000604951 799 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 AC020891.4-201ENST00000605745 93 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 AC007742.2-201ENST00000618226 398 ntBASIC0.14□□□□□ -2.39
UPK1BO75841 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.14□□□□□ -2.39
UPK1BO75841 MIR377-201ENST00000362145 69 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 Y_RNA.3-201ENST00000362331 103 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 Y_RNA.341-201ENST00000365341 102 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 Y_RNA.436-201ENST00000384097 102 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 MT-TN-201ENST00000387400 73 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 AL590004.1-201ENST00000405321 300 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 MCFD2P1-201ENST00000417812 300 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 AC016907.1-201ENST00000419483 435 ntBASIC0.13□□□□□ -2.39
UPK1BO75841 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms