Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
GPC4O75487 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
GPC4O75487 SNORA72.4-201ENST00000384174 132 ntBASIC1.46□□□□□ -2.18
GPC4O75487 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
GPC4O75487 PIGPP3-201ENST00000425307 415 ntBASIC1.46□□□□□ -2.18
GPC4O75487 RNU6-1143P-201ENST00000516125 104 ntBASIC1.46□□□□□ -2.18
GPC4O75487 RNA5SP458-201ENST00000516188 119 ntBASIC1.46□□□□□ -2.18
GPC4O75487 RNU6-327P-201ENST00000516270 127 ntBASIC1.46□□□□□ -2.18
GPC4O75487 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.46□□□□□ -2.18
GPC4O75487 AP000942.3-201ENST00000603702 160 ntBASIC1.46□□□□□ -2.18
GPC4O75487 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.46□□□□□ -2.18
GPC4O75487 AL078604.3-201ENST00000615580 211 ntBASIC1.46□□□□□ -2.18
GPC4O75487 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
GPC4O75487 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
GPC4O75487 MIR522-201ENST00000385071 87 ntBASIC1.45□□□□□ -2.18
GPC4O75487 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
GPC4O75487 SNORA17.3-201ENST00000391159 129 ntBASIC1.45□□□□□ -2.18
GPC4O75487 MLLT10P1-201ENST00000418346 262 ntBASIC1.45□□□□□ -2.18
GPC4O75487 RPL23AP54-201ENST00000495129 419 ntBASIC1.45□□□□□ -2.18
GPC4O75487 RNU6-917P-201ENST00000516294 104 ntBASIC1.45□□□□□ -2.18
GPC4O75487 RNU7-116P-201ENST00000516940 62 ntBASIC1.45□□□□□ -2.18
GPC4O75487 AL160236.1-201ENST00000556317 195 ntBASIC1.45□□□□□ -2.18
GPC4O75487 AC127455.1-201ENST00000565496 145 ntBASIC1.45□□□□□ -2.18
GPC4O75487 MIR4303-201ENST00000581299 66 ntBASIC1.45□□□□□ -2.18
GPC4O75487 MIR4762-201ENST00000585261 75 ntBASIC1.45□□□□□ -2.18
GPC4O75487 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
GPC4O75487 MIR548AY-201ENST00000617669 107 ntBASIC1.45□□□□□ -2.18
GPC4O75487 AC068700.1-201ENST00000565862 3754 ntBASIC1.45□□□□□ -2.18
GPC4O75487 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
GPC4O75487 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.44□□□□□ -2.18
GPC4O75487 SNORD33-201ENST00000362761 85 ntBASIC1.44□□□□□ -2.18
GPC4O75487 RNU6-199P-201ENST00000362954 107 ntBASIC1.44□□□□□ -2.18
GPC4O75487 RNU6-1309P-201ENST00000363305 108 ntBASIC1.44□□□□□ -2.18
GPC4O75487 Y_RNA.140-201ENST00000363474 103 ntBASIC1.44□□□□□ -2.18
GPC4O75487 Y_RNA.162-201ENST00000363683 102 ntBASIC1.44□□□□□ -2.18
GPC4O75487 RNU6-1105P-201ENST00000384774 107 ntBASIC1.44□□□□□ -2.18
GPC4O75487 RNU6-763P-201ENST00000390865 106 ntBASIC1.44□□□□□ -2.18
GPC4O75487 MIR1278-201ENST00000408753 81 ntBASIC1.44□□□□□ -2.18
GPC4O75487 SNX2P2-201ENST00000424553 323 ntBASIC1.44□□□□□ -2.18
GPC4O75487 AC108667.1-201ENST00000428618 249 ntBASIC1.44□□□□□ -2.18
GPC4O75487 AL603825.1-201ENST00000438481 80 ntBASIC1.44□□□□□ -2.18
GPC4O75487 U8.19-201ENST00000459095 133 ntBASIC1.44□□□□□ -2.18
GPC4O75487 AC114811.1-201ENST00000507207 168 ntBASIC1.44□□□□□ -2.18
GPC4O75487 RNU2-31P-201ENST00000516954 155 ntBASIC1.44□□□□□ -2.18
GPC4O75487 SNORA31.24-201ENST00000517232 57 ntBASIC1.44□□□□□ -2.18
GPC4O75487 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.44□□□□□ -2.18
GPC4O75487 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.44□□□□□ -2.18
GPC4O75487 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
GPC4O75487 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
GPC4O75487 U8.5-201ENST00000364528 136 ntBASIC1.43□□□□□ -2.18
GPC4O75487 RNU6-326P-201ENST00000365480 107 ntBASIC1.43□□□□□ -2.18
GPC4O75487 RNU6-163P-201ENST00000384396 106 ntBASIC1.43□□□□□ -2.18
GPC4O75487 RNU6-738P-201ENST00000384531 106 ntBASIC1.43□□□□□ -2.18
GPC4O75487 RNU6-1248P-201ENST00000391096 64 ntBASIC1.43□□□□□ -2.18
GPC4O75487 MTCO2P33-201ENST00000402100 465 ntBASIC1.43□□□□□ -2.18
GPC4O75487 RNU6-1203P-201ENST00000410703 110 ntBASIC1.43□□□□□ -2.18
GPC4O75487 RPL30P13-201ENST00000418873 348 ntBASIC1.43□□□□□ -2.18
GPC4O75487 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
GPC4O75487 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.43□□□□□ -2.18
GPC4O75487 Y_RNA.637-201ENST00000459424 114 ntBASIC1.43□□□□□ -2.18
GPC4O75487 HMGN1P7-201ENST00000491722 313 ntBASIC1.43□□□□□ -2.18
GPC4O75487 DEFB108E-201ENST00000524692 240 ntBASIC1.43□□□□□ -2.18
GPC4O75487 AL512310.8-201ENST00000550183 120 ntBASIC1.43□□□□□ -2.18
GPC4O75487 AL442663.2-201ENST00000554385 511 ntBASIC1.43□□□□□ -2.18
GPC4O75487 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.43□□□□□ -2.18
GPC4O75487 AC120024.3-201ENST00000603167 156 ntBASIC1.43□□□□□ -2.18
GPC4O75487 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
GPC4O75487 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
GPC4O75487 Y_RNA.203-201ENST00000364106 102 ntBASIC1.42□□□□□ -2.18
GPC4O75487 RNU6-662P-201ENST00000384253 104 ntBASIC1.42□□□□□ -2.18
GPC4O75487 RNU6-713P-201ENST00000384761 107 ntBASIC1.42□□□□□ -2.18
GPC4O75487 MIR526A1-201ENST00000384897 85 ntBASIC1.42□□□□□ -2.18
GPC4O75487 MIR653-201ENST00000385279 96 ntBASIC1.42□□□□□ -2.18
GPC4O75487 SNORA36B-201ENST00000410438 131 ntBASIC1.42□□□□□ -2.18
GPC4O75487 SNRPGP10-201ENST00000432323 225 ntBASIC1.42□□□□□ -2.18
GPC4O75487 RPL39P38-201ENST00000467018 153 ntBASIC1.42□□□□□ -2.18
GPC4O75487 AC091959.1-201ENST00000495857 238 ntBASIC1.42□□□□□ -2.18
GPC4O75487 RNU6-1338P-201ENST00000516328 91 ntBASIC1.42□□□□□ -2.18
GPC4O75487 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
GPC4O75487 MIR3664-201ENST00000579074 99 ntBASIC1.42□□□□□ -2.18
GPC4O75487 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
GPC4O75487 RNU6-833P-201ENST00000363486 107 ntBASIC1.41□□□□□ -2.18
GPC4O75487 SNORD50B-201ENST00000364995 70 ntBASIC1.41□□□□□ -2.18
GPC4O75487 Y_RNA.376-201ENST00000365638 108 ntBASIC1.41□□□□□ -2.18
GPC4O75487 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
GPC4O75487 MIR891A-201ENST00000401237 79 ntBASIC1.41□□□□□ -2.18
GPC4O75487 MIR548F4-201ENST00000408515 105 ntBASIC1.41□□□□□ -2.18
GPC4O75487 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
GPC4O75487 Y_RNA.638-201ENST00000459374 113 ntBASIC1.41□□□□□ -2.18
GPC4O75487 CYCTP-201ENST00000504253 315 ntBASIC1.41□□□□□ -2.18
GPC4O75487 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
GPC4O75487 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.41□□□□□ -2.18
GPC4O75487 AC005357.1-201ENST00000588399 301 ntBASIC1.41□□□□□ -2.18
GPC4O75487 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.41□□□□□ -2.18
GPC4O75487 AC027279.3-201ENST00000625055 122 ntBASIC1.41□□□□□ -2.18
GPC4O75487 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
GPC4O75487 RNU6-1209P-201ENST00000363655 107 ntBASIC1.4□□□□□ -2.19
GPC4O75487 Y_RNA.796-201ENST00000364268 102 ntBASIC1.4□□□□□ -2.19
GPC4O75487 Y_RNA.799-201ENST00000364992 102 ntBASIC1.4□□□□□ -2.19
GPC4O75487 Y_RNA.483-201ENST00000384380 101 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms