Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 MIR2053-201ENST00000459295 91 ntBASIC0.35□□□□□ -2.35
CDH16O75309 AC105313.1-201ENST00000509121 353 ntBASIC0.35□□□□□ -2.35
CDH16O75309 RNU6-307P-201ENST00000516743 106 ntBASIC0.35□□□□□ -2.35
CDH16O75309 AC005972.2-201ENST00000604690 348 ntBASIC0.35□□□□□ -2.35
CDH16O75309 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.35□□□□□ -2.35
CDH16O75309 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
CDH16O75309 RNU6-926P-201ENST00000384075 107 ntBASIC0.34□□□□□ -2.36
CDH16O75309 SNORA72-201ENST00000384339 132 ntBASIC0.34□□□□□ -2.36
CDH16O75309 MIR489-201ENST00000384923 84 ntBASIC0.34□□□□□ -2.36
CDH16O75309 SNORA75.4-201ENST00000391278 119 ntBASIC0.34□□□□□ -2.36
CDH16O75309 Y_RNA.592-201ENST00000410274 109 ntBASIC0.34□□□□□ -2.36
CDH16O75309 RNA5SP95-201ENST00000410319 137 ntBASIC0.34□□□□□ -2.36
CDH16O75309 SNRPGP10-201ENST00000432323 225 ntBASIC0.34□□□□□ -2.36
CDH16O75309 CHEK2P4-201ENST00000450340 246 ntBASIC0.34□□□□□ -2.36
CDH16O75309 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.34□□□□□ -2.36
CDH16O75309 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.34□□□□□ -2.36
CDH16O75309 RNU6-120P-201ENST00000516077 103 ntBASIC0.34□□□□□ -2.36
CDH16O75309 RNU6-1213P-201ENST00000517075 94 ntBASIC0.34□□□□□ -2.36
CDH16O75309 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.34□□□□□ -2.36
CDH16O75309 AC093027.1-201ENST00000546698 429 ntBASIC0.34□□□□□ -2.36
CDH16O75309 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.34□□□□□ -2.36
CDH16O75309 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.36
CDH16O75309 AC104695.3-201ENST00000604052 296 ntBASIC0.34□□□□□ -2.36
CDH16O75309 RBM11P1-201ENST00000604951 799 ntBASIC0.34□□□□□ -2.36
CDH16O75309 AC002553.4-201ENST00000616896 331 ntBASIC0.34□□□□□ -2.36
CDH16O75309 AC008133.2-201ENST00000624540 351 ntBASIC0.34□□□□□ -2.36
CDH16O75309 SNORD114-23-201ENST00000363536 72 ntBASIC0.33□□□□□ -2.36
CDH16O75309 MIR216A-201ENST00000385063 110 ntBASIC0.33□□□□□ -2.36
CDH16O75309 SNORD28B-201ENST00000390993 75 ntBASIC0.33□□□□□ -2.36
CDH16O75309 RNU6-131P-201ENST00000391144 107 ntBASIC0.33□□□□□ -2.36
CDH16O75309 RNA5SP193-201ENST00000410353 107 ntBASIC0.33□□□□□ -2.36
CDH16O75309 RNU6-613P-201ENST00000410412 108 ntBASIC0.33□□□□□ -2.36
CDH16O75309 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
CDH16O75309 RNU6-436P-201ENST00000516171 114 ntBASIC0.33□□□□□ -2.36
CDH16O75309 PISRT1.1-201ENST00000616930 107 ntBASIC0.33□□□□□ -2.36
CDH16O75309 MIR4251-201ENST00000635819 61 ntBASIC0.33□□□□□ -2.36
CDH16O75309 MIR1-1-201ENST00000362147 71 ntBASIC0.32□□□□□ -2.36
CDH16O75309 RNU6-369P-201ENST00000362515 102 ntBASIC0.32□□□□□ -2.36
CDH16O75309 Y_RNA.112-201ENST00000363250 102 ntBASIC0.32□□□□□ -2.36
CDH16O75309 Y_RNA.368-201ENST00000365547 113 ntBASIC0.32□□□□□ -2.36
CDH16O75309 Y_RNA.577-201ENST00000384794 101 ntBASIC0.32□□□□□ -2.36
CDH16O75309 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
CDH16O75309 SNORA69.1-201ENST00000390904 137 ntBASIC0.32□□□□□ -2.36
CDH16O75309 MIR1277-201ENST00000408536 78 ntBASIC0.32□□□□□ -2.36
CDH16O75309 RNU4-14P-201ENST00000410858 122 ntBASIC0.32□□□□□ -2.36
CDH16O75309 MTCO2P27-201ENST00000420740 428 ntBASIC0.32□□□□□ -2.36
CDH16O75309 FCF1P4-201ENST00000448326 183 ntBASIC0.32□□□□□ -2.36
CDH16O75309 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.32□□□□□ -2.36
CDH16O75309 AC069439.1-201ENST00000494739 167 ntBASIC0.32□□□□□ -2.36
CDH16O75309 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.32□□□□□ -2.36
CDH16O75309 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
CDH16O75309 RNU6-718P-201ENST00000516166 105 ntBASIC0.32□□□□□ -2.36
CDH16O75309 RNU6-830P-201ENST00000516353 107 ntBASIC0.32□□□□□ -2.36
CDH16O75309 Y_RNA.714-201ENST00000517065 90 ntBASIC0.32□□□□□ -2.36
CDH16O75309 AL355375.2-201ENST00000574825 175 ntBASIC0.32□□□□□ -2.36
CDH16O75309 MIR548AR-201ENST00000582191 57 ntBASIC0.32□□□□□ -2.36
CDH16O75309 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.32□□□□□ -2.36
CDH16O75309 AL669831.3-213ENST00000636676 183 ntBASIC0.32□□□□□ -2.36
CDH16O75309 AC010487.4-201ENST00000637027 61 ntBASIC0.32□□□□□ -2.36
CDH16O75309 Y_RNA.146-201ENST00000363549 102 ntBASIC0.31□□□□□ -2.36
CDH16O75309 Y_RNA.148-201ENST00000363557 117 ntBASIC0.31□□□□□ -2.36
CDH16O75309 Y_RNA.318-201ENST00000365131 97 ntBASIC0.31□□□□□ -2.36
CDH16O75309 Y_RNA.370-201ENST00000365589 108 ntBASIC0.31□□□□□ -2.36
CDH16O75309 RNU6-1323P-201ENST00000384025 107 ntBASIC0.31□□□□□ -2.36
CDH16O75309 RNU6-20P-201ENST00000384106 107 ntBASIC0.31□□□□□ -2.36
CDH16O75309 Y_RNA.446-201ENST00000384178 104 ntBASIC0.31□□□□□ -2.36
CDH16O75309 SNORA2B-201ENST00000384583 137 ntBASIC0.31□□□□□ -2.36
CDH16O75309 MTATP6P26-201ENST00000445926 662 ntBASIC0.31□□□□□ -2.36
CDH16O75309 RNU6-155P-201ENST00000516347 100 ntBASIC0.31□□□□□ -2.36
CDH16O75309 AC011712.1-201ENST00000588959 234 ntBASIC0.31□□□□□ -2.36
CDH16O75309 AC005176.2-201ENST00000596933 147 ntBASIC0.31□□□□□ -2.36
CDH16O75309 PVT1_3.1-201ENST00000620853 95 ntBASIC0.31□□□□□ -2.36
CDH16O75309 AC091925.1-201ENST00000623204 462 ntBASIC0.31□□□□□ -2.36
CDH16O75309 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CDH16O75309 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CDH16O75309 Y_RNA.72-201ENST00000362894 103 ntBASIC0.3□□□□□ -2.36
CDH16O75309 RNU6-626P-201ENST00000363354 107 ntBASIC0.3□□□□□ -2.36
CDH16O75309 Y_RNA.168-201ENST00000363740 102 ntBASIC0.3□□□□□ -2.36
CDH16O75309 RNU6-324P-201ENST00000363957 106 ntBASIC0.3□□□□□ -2.36
CDH16O75309 Y_RNA.393-201ENST00000383936 102 ntBASIC0.3□□□□□ -2.36
CDH16O75309 RNY3P4-201ENST00000384428 101 ntBASIC0.3□□□□□ -2.36
CDH16O75309 RNU6-1215P-201ENST00000384441 102 ntBASIC0.3□□□□□ -2.36
CDH16O75309 RNU6-1156P-201ENST00000410365 100 ntBASIC0.3□□□□□ -2.36
CDH16O75309 RNU6-177P-201ENST00000411257 104 ntBASIC0.3□□□□□ -2.36
CDH16O75309 AC005534.2-201ENST00000431047 433 ntBASIC0.3□□□□□ -2.36
CDH16O75309 SNRPGP14-201ENST00000435400 219 ntBASIC0.3□□□□□ -2.36
CDH16O75309 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
CDH16O75309 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
CDH16O75309 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.3□□□□□ -2.36
CDH16O75309 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CDH16O75309 RN7SL793P-201ENST00000583259 296 ntBASIC0.3□□□□□ -2.36
CDH16O75309 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CDH16O75309 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
CDH16O75309 RNU6-580P-201ENST00000365159 107 ntBASIC0.29□□□□□ -2.36
CDH16O75309 SNORD116-4-201ENST00000384733 96 ntBASIC0.29□□□□□ -2.36
CDH16O75309 MIR625-201ENST00000385047 85 ntBASIC0.29□□□□□ -2.36
CDH16O75309 RNU6-192P-201ENST00000391253 100 ntBASIC0.29□□□□□ -2.36
CDH16O75309 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.29□□□□□ -2.36
CDH16O75309 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.29□□□□□ -2.36
CDH16O75309 MTND4P17-201ENST00000470444 350 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms