Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-1205P-201ENST00000363625 106 ntBASIC1.62□□□□□ -2.15
PRKNO60260 Y_RNA.292-201ENST00000364904 97 ntBASIC1.62□□□□□ -2.15
PRKNO60260 Y_RNA.293-201ENST00000364908 93 ntBASIC1.62□□□□□ -2.15
PRKNO60260 Y_RNA.297-201ENST00000364950 91 ntBASIC1.62□□□□□ -2.15
PRKNO60260 Y_RNA.785-201ENST00000384290 109 ntBASIC1.62□□□□□ -2.15
PRKNO60260 MIR520A-201ENST00000384862 85 ntBASIC1.62□□□□□ -2.15
PRKNO60260 RNU11-5P-201ENST00000391216 129 ntBASIC1.62□□□□□ -2.15
PRKNO60260 RNA5SP212-201ENST00000391223 107 ntBASIC1.62□□□□□ -2.15
PRKNO60260 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
PRKNO60260 SNORA36B-201ENST00000410438 131 ntBASIC1.62□□□□□ -2.15
PRKNO60260 Y_RNA.626-201ENST00000411288 95 ntBASIC1.62□□□□□ -2.15
PRKNO60260 HMGN2P19-201ENST00000425149 265 ntBASIC1.62□□□□□ -2.15
PRKNO60260 AC245047.3-201ENST00000429428 127 ntBASIC1.62□□□□□ -2.15
PRKNO60260 AC069257.2-201ENST00000441819 155 ntBASIC1.62□□□□□ -2.15
PRKNO60260 RPS27P1-201ENST00000450552 247 ntBASIC1.62□□□□□ -2.15
PRKNO60260 Y_RNA.700-201ENST00000516806 100 ntBASIC1.62□□□□□ -2.15
PRKNO60260 RNU7-116P-201ENST00000516940 62 ntBASIC1.62□□□□□ -2.15
PRKNO60260 AC011604.1-201ENST00000545978 196 ntBASIC1.62□□□□□ -2.15
PRKNO60260 AC127455.1-201ENST00000565496 145 ntBASIC1.62□□□□□ -2.15
PRKNO60260 AP003357.1-201ENST00000604497 148 ntBASIC1.62□□□□□ -2.15
PRKNO60260 AC073349.3-201ENST00000617616 186 ntBASIC1.62□□□□□ -2.15
PRKNO60260 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.62□□□□□ -2.15
PRKNO60260 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.62□□□□□ -2.15
PRKNO60260 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.62□□□□□ -2.15
PRKNO60260 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
PRKNO60260 Y_RNA.83-201ENST00000363005 113 ntBASIC1.61□□□□□ -2.15
PRKNO60260 RNU1-17P-201ENST00000363022 152 ntBASIC1.61□□□□□ -2.15
PRKNO60260 Y_RNA.140-201ENST00000363474 103 ntBASIC1.61□□□□□ -2.15
PRKNO60260 Y_RNA.199-201ENST00000364014 102 ntBASIC1.61□□□□□ -2.15
PRKNO60260 RNU4-10P-201ENST00000364383 140 ntBASIC1.61□□□□□ -2.15
PRKNO60260 RNY4P28-201ENST00000365281 93 ntBASIC1.61□□□□□ -2.15
PRKNO60260 RNU6-1080P-201ENST00000383982 107 ntBASIC1.61□□□□□ -2.15
PRKNO60260 SNORA72-201ENST00000384339 132 ntBASIC1.61□□□□□ -2.15
PRKNO60260 RNA5SP100-201ENST00000410903 110 ntBASIC1.61□□□□□ -2.15
PRKNO60260 RNA5SP59-201ENST00000410922 110 ntBASIC1.61□□□□□ -2.15
PRKNO60260 RPL23AP6-201ENST00000446637 472 ntBASIC1.61□□□□□ -2.15
PRKNO60260 COX6CP14-201ENST00000469580 174 ntBASIC1.61□□□□□ -2.15
PRKNO60260 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.61□□□□□ -2.15
PRKNO60260 RNU6-341P-201ENST00000516973 96 ntBASIC1.61□□□□□ -2.15
PRKNO60260 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.61□□□□□ -2.15
PRKNO60260 RNA5SP437-201ENST00000517249 129 ntBASIC1.61□□□□□ -2.15
PRKNO60260 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.61□□□□□ -2.15
PRKNO60260 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.61□□□□□ -2.15
PRKNO60260 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.61□□□□□ -2.15
PRKNO60260 AL929325.1-201ENST00000603096 117 ntBASIC1.61□□□□□ -2.15
PRKNO60260 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.61□□□□□ -2.15
PRKNO60260 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.61□□□□□ -2.15
PRKNO60260 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
PRKNO60260 SNORA1B-201ENST00000362535 133 ntBASIC1.6□□□□□ -2.15
PRKNO60260 SNORA63D-201ENST00000364359 132 ntBASIC1.6□□□□□ -2.15
PRKNO60260 SNORA4.2-201ENST00000365313 147 ntBASIC1.6□□□□□ -2.15
PRKNO60260 RNU6-296P-201ENST00000384608 107 ntBASIC1.6□□□□□ -2.15
PRKNO60260 MTND5P15-201ENST00000434246 349 ntBASIC1.6□□□□□ -2.15
PRKNO60260 RN7SL274P-201ENST00000492268 272 ntBASIC1.6□□□□□ -2.15
PRKNO60260 RNU2-56P-201ENST00000516826 190 ntBASIC1.6□□□□□ -2.15
PRKNO60260 SNORA81.3-201ENST00000517283 198 ntBASIC1.6□□□□□ -2.15
PRKNO60260 AC012493.3-201ENST00000604494 112 ntBASIC1.6□□□□□ -2.15
PRKNO60260 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.6□□□□□ -2.15
PRKNO60260 WWP1P1-201ENST00000466609 2769 ntBASIC1.6□□□□□ -2.15
PRKNO60260 AC100821.1-201ENST00000523153 2479 ntBASIC1.6□□□□□ -2.15
PRKNO60260 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
PRKNO60260 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
PRKNO60260 Y_RNA.29-201ENST00000362570 113 ntBASIC1.59□□□□□ -2.15
PRKNO60260 Y_RNA.338-201ENST00000365320 114 ntBASIC1.59□□□□□ -2.15
PRKNO60260 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.59□□□□□ -2.15
PRKNO60260 HSPE1P9-201ENST00000440046 311 ntBASIC1.59□□□□□ -2.15
PRKNO60260 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.59□□□□□ -2.15
PRKNO60260 SNORD13-201ENST00000459299 104 ntBASIC1.59□□□□□ -2.15
PRKNO60260 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
PRKNO60260 SNORA31.17-201ENST00000516953 127 ntBASIC1.59□□□□□ -2.15
PRKNO60260 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
PRKNO60260 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
PRKNO60260 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.59□□□□□ -2.15
PRKNO60260 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.59□□□□□ -2.15
PRKNO60260 MIR8054-201ENST00000620877 86 ntBASIC1.59□□□□□ -2.15
PRKNO60260 AL365265.1-201ENST00000621045 234 ntBASIC1.59□□□□□ -2.15
PRKNO60260 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.59□□□□□ -2.15
PRKNO60260 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
PRKNO60260 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
PRKNO60260 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PRKNO60260 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
PRKNO60260 Y_RNA.304-201ENST00000365011 112 ntBASIC1.58□□□□□ -2.16
PRKNO60260 RNA5SP190-201ENST00000365222 118 ntBASIC1.58□□□□□ -2.16
PRKNO60260 MIR562-201ENST00000384894 95 ntBASIC1.58□□□□□ -2.16
PRKNO60260 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PRKNO60260 RNU6-440P-201ENST00000390882 105 ntBASIC1.58□□□□□ -2.16
PRKNO60260 MIR548I3-201ENST00000408378 149 ntBASIC1.58□□□□□ -2.16
PRKNO60260 MIR548I1-201ENST00000408810 149 ntBASIC1.58□□□□□ -2.16
PRKNO60260 RNU6-383P-201ENST00000410864 94 ntBASIC1.58□□□□□ -2.16
PRKNO60260 AC244636.1-201ENST00000421152 228 ntBASIC1.58□□□□□ -2.16
PRKNO60260 PIGPP3-201ENST00000425307 415 ntBASIC1.58□□□□□ -2.16
PRKNO60260 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.58□□□□□ -2.16
PRKNO60260 AL138752.1-201ENST00000452964 351 ntBASIC1.58□□□□□ -2.16
PRKNO60260 Y_RNA.644-201ENST00000459006 113 ntBASIC1.58□□□□□ -2.16
PRKNO60260 RNU6-437P-201ENST00000459408 95 ntBASIC1.58□□□□□ -2.16
PRKNO60260 AL049830.1-201ENST00000468034 425 ntBASIC1.58□□□□□ -2.16
PRKNO60260 RNY3P16-201ENST00000516338 101 ntBASIC1.58□□□□□ -2.16
PRKNO60260 Y_RNA.674-201ENST00000516362 113 ntBASIC1.58□□□□□ -2.16
PRKNO60260 AP002004.2-201ENST00000531656 154 ntBASIC1.58□□□□□ -2.16
PRKNO60260 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms