Protein–RNA interactions for Protein: O43617

TRAPPC3, Trafficking protein particle complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3O43617 SNORA2B-201ENST00000384583 137 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 MIR573-201ENST00000384964 99 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 MIR181A1-201ENST00000385026 110 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 MIR140-201ENST00000385282 100 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
TRAPPC3O43617 MIR548K-201ENST00000408406 116 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 RNU6-994P-201ENST00000410507 111 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 MTCO3P10-201ENST00000455912 772 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 RNU6-436P-201ENST00000516171 114 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAPPC3O43617 AC087588.2-201ENST00000617667 426 ntBASIC0.19□□□□□ -2.38
TRAPPC3O43617 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAPPC3O43617 MIR18A-201ENST00000362310 71 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 Y_RNA.2-201ENST00000362330 96 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 snoU2-30.1-201ENST00000365012 70 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 Y_RNA.559-201ENST00000384686 107 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 MIR570-201ENST00000384917 97 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 MIR15B-201ENST00000385045 98 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 RNU2-54P-201ENST00000410299 190 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 RNA5SP127-201ENST00000411051 133 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 AC067940.1-201ENST00000458411 300 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 RPL7P42-201ENST00000481005 679 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAPPC3O43617 AC116353.2-201ENST00000505332 712 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 RNU6-1016P-201ENST00000516689 94 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 AC012433.1-201ENST00000588916 398 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 AC005972.2-201ENST00000604690 348 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAPPC3O43617 AL109933.3-201ENST00000619095 188 ntBASIC0.18□□□□□ -2.38
TRAPPC3O43617 MIR103A1-201ENST00000362165 78 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 Y_RNA.85-201ENST00000363014 111 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 SNORD44.1-201ENST00000363202 61 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 Y_RNA.157-201ENST00000363638 102 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 Y_RNA.450-201ENST00000384198 113 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 RNU6-601P-201ENST00000384540 107 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 RNA5SP63-201ENST00000391225 112 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAPPC3O43617 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAPPC3O43617 MTND2P22-201ENST00000444325 1033 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAPPC3O43617 RPL30P15-201ENST00000457129 321 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 NDUFA4P2-201ENST00000489989 244 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 RNU6-830P-201ENST00000516353 107 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 AC022616.4-201ENST00000522985 181 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 AC245505.1-201ENST00000556398 224 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 MIR548AO-201ENST00000579992 96 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 MIR4300-201ENST00000581016 96 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 RBM11P1-201ENST00000604951 799 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 MIR1244-1-201ENST00000612829 85 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 AC015540.1-201ENST00000615828 501 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 MIR1244-3-201ENST00000635744 85 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 MIR1244-2-201ENST00000636449 85 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 MIR1244-4-202ENST00000636813 85 ntBASIC0.17□□□□□ -2.38
TRAPPC3O43617 SNORA72-201ENST00000384339 132 ntBASIC0.16□□□□□ -2.38
TRAPPC3O43617 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
TRAPPC3O43617 RNU6-131P-201ENST00000391144 107 ntBASIC0.16□□□□□ -2.38
TRAPPC3O43617 MTND3P10-201ENST00000450967 341 ntBASIC0.16□□□□□ -2.38
TRAPPC3O43617 HMGN1P10-201ENST00000474557 553 ntBASIC0.16□□□□□ -2.38
TRAPPC3O43617 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAPPC3O43617 AC024909.2-201ENST00000553035 286 ntBASIC0.16□□□□□ -2.38
TRAPPC3O43617 AL355073.2-201ENST00000612106 557 ntBASIC0.16□□□□□ -2.38
TRAPPC3O43617 AC092794.2-201ENST00000620933 563 ntBASIC0.16□□□□□ -2.38
TRAPPC3O43617 Y_RNA.9-201ENST00000362354 101 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 RNU6-593P-201ENST00000364716 112 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 Y_RNA.476-201ENST00000384347 108 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 RNA5SP118-201ENST00000410385 109 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 AL139396.1-201ENST00000421137 167 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAPPC3O43617 HMGN2P32-201ENST00000444648 269 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 RNU2-13P-201ENST00000515909 113 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 RNU6-120P-201ENST00000516077 103 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 MIR2115-201ENST00000516657 100 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.15□□□□□ -2.39
TRAPPC3O43617 AC093027.1-201ENST00000546698 429 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 LARP7P1-201ENST00000605576 316 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 AC015726.2-201ENST00000620112 122 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 AC078938.1-201ENST00000620993 318 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 MTND1P7-201ENST00000632801 297 ntBASIC0.15□□□□□ -2.39
TRAPPC3O43617 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.14□□□□□ -2.39
TRAPPC3O43617 Y_RNA.146-201ENST00000363549 102 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 RNU6-268P-201ENST00000364174 107 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 RNU6-99P-201ENST00000364721 107 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 Y_RNA.295-201ENST00000364918 102 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 Y_RNA.446-201ENST00000384178 104 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 RNU6-125P-201ENST00000384505 107 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 MIR520H-201ENST00000385126 88 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 MT-TN-201ENST00000387400 73 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 U8.17-201ENST00000391292 132 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
TRAPPC3O43617 MIR548F5-201ENST00000408421 86 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 SNORD83.1-201ENST00000411362 77 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 AC009161.1-201ENST00000417306 376 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 MTND4P28-201ENST00000426217 387 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 AC015818.7-201ENST00000428754 109 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 RPS3AP52-201ENST00000435639 297 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 AC087499.7-201ENST00000441958 109 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 CHEK2P4-201ENST00000450340 246 ntBASIC0.14□□□□□ -2.39
TRAPPC3O43617 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms