Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 Y_RNA.101-201ENST00000363154 102 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 Y_RNA.368-201ENST00000365547 113 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 SNORA72-201ENST00000384339 132 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 Y_RNA.482-201ENST00000384377 111 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 SNRPGP10-201ENST00000432323 225 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.35□□□□□ -2.35
CLOCKO15516 MIR2053-201ENST00000459295 91 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 MIR548AR-201ENST00000582191 57 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 AL355073.2-201ENST00000612106 557 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 AC091925.1-201ENST00000623204 462 ntBASIC0.35□□□□□ -2.35
CLOCKO15516 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.35□□□□□ -2.35
CLOCKO15516 Y_RNA.370-201ENST00000365589 108 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 Y_RNA.404-201ENST00000383978 102 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 MTND4P28-201ENST00000426217 387 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 CHEK2P4-201ENST00000450340 246 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 MTND3P10-201ENST00000450967 341 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 AC107399.1-201ENST00000451226 265 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.34□□□□□ -2.36
CLOCKO15516 AC011352.1-201ENST00000512300 793 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 MIR2115-201ENST00000516657 100 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 AL355375.2-201ENST00000574825 175 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 PISRT1.1-201ENST00000616930 107 ntBASIC0.34□□□□□ -2.36
CLOCKO15516 Y_RNA.148-201ENST00000363557 117 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 Y_RNA.168-201ENST00000363740 102 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 Y_RNA.453-201ENST00000384223 109 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 MIR140-201ENST00000385282 100 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 AC116353.2-201ENST00000505332 712 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 RNU6-1012P-201ENST00000516606 109 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 U4.5-201ENST00000617137 123 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 MIR924-201ENST00000638017 53 ntBASIC0.33□□□□□ -2.36
CLOCKO15516 Y_RNA.339-201ENST00000365325 102 ntBASIC0.32□□□□□ -2.36
CLOCKO15516 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
CLOCKO15516 SNORD28B-201ENST00000390993 75 ntBASIC0.32□□□□□ -2.36
CLOCKO15516 RNA5SP95-201ENST00000410319 137 ntBASIC0.32□□□□□ -2.36
CLOCKO15516 AL358176.2-201ENST00000425769 204 ntBASIC0.32□□□□□ -2.36
CLOCKO15516 Z83846.1-201ENST00000446798 265 ntBASIC0.32□□□□□ -2.36
CLOCKO15516 MIR3688-2-201ENST00000636963 87 ntBASIC0.32□□□□□ -2.36
CLOCKO15516 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CLOCKO15516 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
CLOCKO15516 RNU6-324P-201ENST00000363957 106 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 SNORD14E-201ENST00000364009 85 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 RNU6-99P-201ENST00000364721 107 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 RNU6-396P-201ENST00000365369 105 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 RNU6-716P-201ENST00000365621 103 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 RNU6-926P-201ENST00000384075 107 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 SNORD38C-201ENST00000384381 69 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 SNORA69.1-201ENST00000390904 137 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 RNU6-1199P-201ENST00000411249 104 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 MTND3P8-201ENST00000412909 339 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
CLOCKO15516 FCF1P4-201ENST00000448326 183 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 RNU6-436P-201ENST00000516171 114 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.31□□□□□ -2.36
CLOCKO15516 EIF1P4-201ENST00000572664 335 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 AC012433.1-201ENST00000588916 398 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 AC005176.2-201ENST00000596933 147 ntBASIC0.31□□□□□ -2.36
CLOCKO15516 RNU6-192P-201ENST00000391253 100 ntBASIC0.3□□□□□ -2.36
CLOCKO15516 RNU2-70P-201ENST00000410718 179 ntBASIC0.3□□□□□ -2.36
CLOCKO15516 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.3□□□□□ -2.36
CLOCKO15516 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.3□□□□□ -2.36
CLOCKO15516 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
CLOCKO15516 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
CLOCKO15516 AC060780.3-201ENST00000589464 80 ntBASIC0.3□□□□□ -2.36
CLOCKO15516 MIR8087-201ENST00000612745 78 ntBASIC0.3□□□□□ -2.36
CLOCKO15516 AC087588.2-201ENST00000617667 426 ntBASIC0.3□□□□□ -2.36
CLOCKO15516 Y_RNA.446-201ENST00000384178 104 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 MIR573-201ENST00000384964 99 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 SNORA75.4-201ENST00000391278 119 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 Y_RNA.592-201ENST00000410274 109 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.29□□□□□ -2.36
CLOCKO15516 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.29□□□□□ -2.36
CLOCKO15516 AC093534.1-201ENST00000504977 132 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.29□□□□□ -2.36
CLOCKO15516 RNU6-155P-201ENST00000516347 100 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 RNU6-830P-201ENST00000516353 107 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 MIR4514-201ENST00000581410 57 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 RBM11P1-201ENST00000604951 799 ntBASIC0.29□□□□□ -2.36
CLOCKO15516 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.29□□□□□ -2.36
CLOCKO15516 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 Y_RNA.86-201ENST00000363020 111 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 Y_RNA.88-201ENST00000363029 99 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 Y_RNA.115-201ENST00000363272 98 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 RNU6-626P-201ENST00000363354 107 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 Y_RNA.376-201ENST00000365638 108 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 RNU6-20P-201ENST00000384106 107 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 Y_RNA.577-201ENST00000384794 101 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 MIR625-201ENST00000385047 85 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 SNORD115-47-201ENST00000391226 86 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 MTCO2P27-201ENST00000420740 428 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 RNU6-720P-201ENST00000516363 108 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 RNA5SP330-201ENST00000517096 96 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 AC087685.1-201ENST00000587507 141 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 AC015726.2-201ENST00000620112 122 ntBASIC0.28□□□□□ -2.36
CLOCKO15516 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms