Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC108729.3-201ENST00000513484 108 ntBASIC0.89□□□□□ -2.27
SLC28A1O00337 RNU6-237P-201ENST00000515985 71 ntBASIC0.89□□□□□ -2.27
SLC28A1O00337 SNORA18.7-201ENST00000516910 131 ntBASIC0.89□□□□□ -2.27
SLC28A1O00337 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.89□□□□□ -2.27
SLC28A1O00337 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
SLC28A1O00337 MIR103A2-201ENST00000362154 78 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 Y_RNA.58-201ENST00000362807 102 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 RNA5SP264-201ENST00000363115 107 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 Y_RNA.154-201ENST00000363624 102 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 RNY3P1-201ENST00000365085 102 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 RNY3-201ENST00000365484 102 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 MIR942-201ENST00000401111 86 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 U8.20-201ENST00000459445 131 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 RNU7-43P-201ENST00000516554 64 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 AP003357.1-201ENST00000604497 148 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 AL359821.1-201ENST00000605519 182 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 SNORD58B-201ENST00000607313 66 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 JPX_2.1-201ENST00000614161 69 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 AC007742.2-201ENST00000618226 398 ntBASIC0.88□□□□□ -2.27
SLC28A1O00337 SNORD81.1-201ENST00000363064 77 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 SNORD14E-201ENST00000364009 85 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 Y_RNA.203-201ENST00000364106 102 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 RNY3P14-201ENST00000384309 102 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 RNU6-937P-201ENST00000384325 106 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 Y_RNA.551-201ENST00000384661 102 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 COX6CP14-201ENST00000469580 174 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.87□□□□□ -2.27
SLC28A1O00337 RPL23AP54-201ENST00000495129 419 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 RNU7-41P-201ENST00000515917 61 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 AC024405.2-202ENST00000532731 184 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 MIR4764-201ENST00000580680 88 ntBASIC0.87□□□□□ -2.27
SLC28A1O00337 RNA5SP48-201ENST00000363969 126 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 RNU4-50P-201ENST00000364361 141 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 RNU6-392P-201ENST00000364926 101 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 Y_RNA.330-201ENST00000365230 109 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 SNORD63-201ENST00000384262 68 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 RNU4-30P-201ENST00000410245 143 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 SNORD123-201ENST00000459473 70 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 MTND3P22-201ENST00000510932 243 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.86□□□□□ -2.27
SLC28A1O00337 RNU7-115P-201ENST00000516433 55 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 AC127455.1-201ENST00000565496 145 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 MIR3145-201ENST00000580727 82 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 AC087685.1-201ENST00000587507 141 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 AC006157.1-201ENST00000611750 366 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 MIR548AY-201ENST00000617669 107 ntBASIC0.86□□□□□ -2.27
SLC28A1O00337 Y_RNA.80-201ENST00000362996 102 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 SNORA25.3-201ENST00000363205 127 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 Y_RNA.315-201ENST00000365117 102 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 RNU6-53P-201ENST00000365367 106 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 Y_RNA.471-201ENST00000384312 102 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 Y_RNA.485-201ENST00000384395 102 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 RNY1P14-201ENST00000384426 108 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 MIR802-201ENST00000390235 94 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 HMGN1P10-201ENST00000474557 553 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 AC010655.3-201ENST00000478818 450 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 AC117454.1-201ENST00000491120 168 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 TRMT112P2-201ENST00000512910 132 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 MIR4498-201ENST00000577599 66 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 MIR4781-201ENST00000585250 76 ntBASIC0.85□□□□□ -2.27
SLC28A1O00337 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.85□□□□□ -2.27
SLC28A1O00337 Y_RNA.143-201ENST00000363520 106 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 Y_RNA.197-201ENST00000364004 102 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 Y_RNA.579-201ENST00000390939 94 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 FABP5P4-201ENST00000437203 171 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 AC040926.1-201ENST00000530195 238 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 MIR4795-201ENST00000584182 89 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 Y_RNA.804-201ENST00000615262 101 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 SEPT14P17-201ENST00000617978 177 ntBASIC0.84□□□□□ -2.27
SLC28A1O00337 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.84□□□□□ -2.28
SLC28A1O00337 RNU4-73P-201ENST00000363164 141 ntBASIC0.83□□□□□ -2.28
SLC28A1O00337 U8.7-201ENST00000364940 136 ntBASIC0.83□□□□□ -2.28
SLC28A1O00337 SNORD38C-201ENST00000384381 69 ntBASIC0.83□□□□□ -2.28
SLC28A1O00337 MT-TD-201ENST00000387419 68 ntBASIC0.83□□□□□ -2.28
SLC28A1O00337 POLR2KP2-201ENST00000438155 177 ntBASIC0.83□□□□□ -2.28
SLC28A1O00337 RNU6-475P-201ENST00000516073 104 ntBASIC0.83□□□□□ -2.28
SLC28A1O00337 AP003716.2-201ENST00000528260 108 ntBASIC0.83□□□□□ -2.28
SLC28A1O00337 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
SLC28A1O00337 AL080274.1-201ENST00000605565 220 ntBASIC0.83□□□□□ -2.28
SLC28A1O00337 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SLC28A1O00337 RNU6-1209P-201ENST00000363655 107 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 Y_RNA.338-201ENST00000365320 114 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 Y_RNA.383-201ENST00000383855 97 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 RNU6-442P-201ENST00000383968 104 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.82□□□□□ -2.28
SLC28A1O00337 MIR2681-201ENST00000581814 105 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 SNORD113-5-201ENST00000607261 78 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
SLC28A1O00337 Y_RNA.112-201ENST00000363250 102 ntBASIC0.81□□□□□ -2.28
SLC28A1O00337 Y_RNA.796-201ENST00000364268 102 ntBASIC0.81□□□□□ -2.28
SLC28A1O00337 Y_RNA.799-201ENST00000364992 102 ntBASIC0.81□□□□□ -2.28
SLC28A1O00337 RNU6-1248P-201ENST00000391096 64 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms