Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC018638.8-201ENST00000588755 281 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 AC005176.2-201ENST00000596933 147 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 AC240442.1-201ENST00000616055 283 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 MIR6515-201ENST00000619843 57 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 Y_RNA.172-201ENST00000363765 102 ntBASIC0.19□□□□□ -2.38
UPK1AO00322 Y_RNA.450-201ENST00000384198 113 ntBASIC0.19□□□□□ -2.38
UPK1AO00322 RNU6-510P-201ENST00000391239 108 ntBASIC0.19□□□□□ -2.38
UPK1AO00322 RNU6-192P-201ENST00000391253 100 ntBASIC0.19□□□□□ -2.38
UPK1AO00322 MTND4P28-201ENST00000426217 387 ntBASIC0.19□□□□□ -2.38
UPK1AO00322 JPX_2.1-201ENST00000614161 69 ntBASIC0.19□□□□□ -2.38
UPK1AO00322 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.18□□□□□ -2.38
UPK1AO00322 Y_RNA.101-201ENST00000363154 102 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 Y_RNA.122-201ENST00000363331 96 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 RNU6-442P-201ENST00000383968 104 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 SNORA51.10-201ENST00000384418 136 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 MIR570-201ENST00000384917 97 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 MIR216A-201ENST00000385063 110 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 SNORA69.1-201ENST00000390904 137 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.18□□□□□ -2.38
UPK1AO00322 MTND3P10-201ENST00000450967 341 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 AC093534.1-201ENST00000504977 132 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.18□□□□□ -2.38
UPK1AO00322 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 AC055872.1-201ENST00000570978 278 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 AP000753.3-201ENST00000604083 169 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 AC092634.7-201ENST00000621022 103 ntBASIC0.18□□□□□ -2.38
UPK1AO00322 MIR18A-201ENST00000362310 71 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 RNU6-99P-201ENST00000364721 107 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 RNU6-934P-201ENST00000365154 107 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 RNU6-767P-201ENST00000384132 107 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 Y_RNA.453-201ENST00000384223 109 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 Y_RNA.482-201ENST00000384377 111 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 Y_RNA.554-201ENST00000384672 102 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 MIR625-201ENST00000385047 85 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 MIR548K-201ENST00000408406 116 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.17□□□□□ -2.38
UPK1AO00322 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.17□□□□□ -2.38
UPK1AO00322 AC116353.2-201ENST00000505332 712 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 Pinc.1-201ENST00000616452 154 ntBASIC0.17□□□□□ -2.38
UPK1AO00322 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.17□□□□□ -2.38
UPK1AO00322 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 MTCO2P33-201ENST00000402100 465 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 RNU6-855P-201ENST00000410395 104 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 RNU6-710P-201ENST00000410424 105 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 MTCO3P10-201ENST00000455912 772 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.16□□□□□ -2.38
UPK1AO00322 SCARNA8-201ENST00000515924 131 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 RNU6-1012P-201ENST00000516606 109 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.16□□□□□ -2.38
UPK1AO00322 MIR3612-201ENST00000579753 87 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 AC087685.1-201ENST00000587507 141 ntBASIC0.16□□□□□ -2.38
UPK1AO00322 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
UPK1AO00322 MIR377-201ENST00000362145 69 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 RNU4-75P-201ENST00000364621 146 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 Y_RNA.404-201ENST00000383978 102 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 Y_RNA.446-201ENST00000384178 104 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 Y_RNA.537-201ENST00000384626 109 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 MT-TN-201ENST00000387400 73 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 RNU6-205P-201ENST00000390858 107 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 U8.17-201ENST00000391292 132 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
UPK1AO00322 RNU2-70P-201ENST00000410718 179 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 PRDX4P1-201ENST00000507189 574 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 AC011352.1-201ENST00000512300 793 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 SNORA25.12-201ENST00000516202 82 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 RNU7-116P-201ENST00000516940 62 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.15□□□□□ -2.39
UPK1AO00322 MIR4771-2-201ENST00000577758 74 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 MIR548AO-201ENST00000579992 96 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 MIR4771-1-201ENST00000582617 74 ntBASIC0.15□□□□□ -2.39
UPK1AO00322 SNORA1.2-201ENST00000365189 134 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 Y_RNA.355-201ENST00000365462 98 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 RNU6-20P-201ENST00000384106 107 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 MIR598-201ENST00000384868 97 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 RNU6-679P-201ENST00000391003 106 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 SNORD78.2-201ENST00000391076 69 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 Y_RNA.592-201ENST00000410274 109 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 SNORD83.1-201ENST00000411362 77 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.14□□□□□ -2.39
UPK1AO00322 AC092989.1-201ENST00000481235 277 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 NDUFA4P2-201ENST00000489989 244 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 RNU6-436P-201ENST00000516171 114 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 RNU6-264P-201ENST00000517134 104 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.14□□□□□ -2.39
UPK1AO00322 POLR3GP1-201ENST00000594073 261 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 MIR4791-201ENST00000607666 84 ntBASIC0.14□□□□□ -2.39
UPK1AO00322 RNU6-369P-201ENST00000362515 102 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 RNU6-626P-201ENST00000363354 107 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 SNORD114-23-201ENST00000363536 72 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 RNU6-1323P-201ENST00000384025 107 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 SNORA75.4-201ENST00000391278 119 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 MTND3P8-201ENST00000412909 339 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 MTCO2P27-201ENST00000420740 428 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.13□□□□□ -2.39
UPK1AO00322 snoU13.21-201ENST00000459368 105 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms