Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 Y_RNA.368-201ENST00000365547 113 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 MLLT10P1-201ENST00000418346 262 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 SNRPGP14-201ENST00000435400 219 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 CHEK2P4-201ENST00000450340 246 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 AC093027.1-201ENST00000546698 429 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 MIR1244-1-201ENST00000612829 85 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 AC091925.1-201ENST00000623204 462 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.36□□□□□ -2.35
SMCO2A6NFE2 MIR1244-3-201ENST00000635744 85 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 MIR1244-2-201ENST00000636449 85 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 MIR1244-4-202ENST00000636813 85 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.36□□□□□ -2.35
SMCO2A6NFE2 Y_RNA.88-201ENST00000363029 99 ntBASIC0.35□□□□□ -2.35
SMCO2A6NFE2 RNU6-342P-201ENST00000384521 104 ntBASIC0.35□□□□□ -2.35
SMCO2A6NFE2 MIR216A-201ENST00000385063 110 ntBASIC0.35□□□□□ -2.35
SMCO2A6NFE2 SNORD28B-201ENST00000390993 75 ntBASIC0.35□□□□□ -2.35
SMCO2A6NFE2 RNU6-131P-201ENST00000391144 107 ntBASIC0.35□□□□□ -2.35
SMCO2A6NFE2 Y_RNA.592-201ENST00000410274 109 ntBASIC0.35□□□□□ -2.35
SMCO2A6NFE2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
SMCO2A6NFE2 RNU6-307P-201ENST00000516743 106 ntBASIC0.35□□□□□ -2.35
SMCO2A6NFE2 MIR4300-201ENST00000581016 96 ntBASIC0.35□□□□□ -2.35
SMCO2A6NFE2 SNORD114-23-201ENST00000363536 72 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 RNU6-1323P-201ENST00000384025 107 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.453-201ENST00000384223 109 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 RNY3P4-201ENST00000384428 101 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 SNORA2B-201ENST00000384583 137 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 RNA5SP95-201ENST00000410319 137 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.34□□□□□ -2.36
SMCO2A6NFE2 MIR2053-201ENST00000459295 91 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 RNU6-966P-201ENST00000516479 104 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 MIR2115-201ENST00000516657 100 ntBASIC0.34□□□□□ -2.36
SMCO2A6NFE2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SMCO2A6NFE2 MIR377-201ENST00000362145 69 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 MIR1-1-201ENST00000362147 71 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.3-201ENST00000362331 103 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 RNU6-99P-201ENST00000364721 107 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.577-201ENST00000384794 101 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 MTCO2P27-201ENST00000420740 428 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 FCF1P4-201ENST00000448326 183 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 AC107399.1-201ENST00000451226 265 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.33□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.714-201ENST00000517065 90 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.33□□□□□ -2.36
SMCO2A6NFE2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.33□□□□□ -2.36
SMCO2A6NFE2 AC087685.1-201ENST00000587507 141 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 AC080013.6-201ENST00000606185 215 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 AL355073.2-201ENST00000612106 557 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 MIR7111-201ENST00000619751 72 ntBASIC0.33□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.146-201ENST00000363549 102 ntBASIC0.32□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.32□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.446-201ENST00000384178 104 ntBASIC0.32□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.516-201ENST00000384541 124 ntBASIC0.32□□□□□ -2.36
SMCO2A6NFE2 MIR573-201ENST00000384964 99 ntBASIC0.32□□□□□ -2.36
SMCO2A6NFE2 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
SMCO2A6NFE2 MT-TN-201ENST00000387400 73 ntBASIC0.32□□□□□ -2.36
SMCO2A6NFE2 SNORA75.4-201ENST00000391278 119 ntBASIC0.32□□□□□ -2.36
SMCO2A6NFE2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.31□□□□□ -2.36
SMCO2A6NFE2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.31□□□□□ -2.36
SMCO2A6NFE2 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.86-201ENST00000363020 111 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 RNU6-623P-201ENST00000363143 105 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.148-201ENST00000363557 117 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 SNORA69.1-201ENST00000390904 137 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 RNU6-192P-201ENST00000391253 100 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 AC093534.1-201ENST00000504977 132 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.31□□□□□ -2.36
SMCO2A6NFE2 RN7SL793P-201ENST00000583259 296 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 AC005176.2-201ENST00000596933 147 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 AC022441.3-201ENST00000605737 136 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 AC007742.2-201ENST00000618226 398 ntBASIC0.31□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.230-201ENST00000364348 109 ntBASIC0.3□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.436-201ENST00000384097 102 ntBASIC0.3□□□□□ -2.36
SMCO2A6NFE2 RNU6-20P-201ENST00000384106 107 ntBASIC0.3□□□□□ -2.36
SMCO2A6NFE2 SNORD115-47-201ENST00000391226 86 ntBASIC0.3□□□□□ -2.36
SMCO2A6NFE2 AC005534.2-201ENST00000431047 433 ntBASIC0.3□□□□□ -2.36
SMCO2A6NFE2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.3□□□□□ -2.36
SMCO2A6NFE2 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
SMCO2A6NFE2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.3□□□□□ -2.36
SMCO2A6NFE2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.3□□□□□ -2.36
SMCO2A6NFE2 AC012433.1-201ENST00000588916 398 ntBASIC0.3□□□□□ -2.36
SMCO2A6NFE2 AC002553.4-201ENST00000616896 331 ntBASIC0.3□□□□□ -2.36
SMCO2A6NFE2 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.112-201ENST00000363250 102 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 RNU6-626P-201ENST00000363354 107 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.310-201ENST00000365063 113 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 RNU6-396P-201ENST00000365369 105 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 RNU4-45P-201ENST00000365469 141 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.537-201ENST00000384626 109 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 RNU2-70P-201ENST00000410718 179 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 RNU2-13P-201ENST00000515909 113 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 RNU7-116P-201ENST00000516940 62 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 Pinc.1-201ENST00000616452 154 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 PISRT1.1-201ENST00000616930 107 ntBASIC0.29□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.72-201ENST00000362894 103 ntBASIC0.28□□□□□ -2.36
SMCO2A6NFE2 SNORD45.3-201ENST00000363836 72 ntBASIC0.28□□□□□ -2.36
SMCO2A6NFE2 SNORD14E-201ENST00000364009 85 ntBASIC0.28□□□□□ -2.36
SMCO2A6NFE2 Y_RNA.376-201ENST00000365638 108 ntBASIC0.28□□□□□ -2.36
SMCO2A6NFE2 RNU6-926P-201ENST00000384075 107 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms