Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC020661.2-201ENST00000560114 134 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 MIR3684-201ENST00000579779 74 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 MIR151B-201ENST00000584249 96 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 AC124312.5-201ENST00000604451 268 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 AL121655.1-201ENST00000605811 308 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.772-201ENST00000606692 102 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 MIR1302-2-201ENST00000607096 138 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.28-201ENST00000362554 111 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-199P-201ENST00000362954 107 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-801P-201ENST00000364087 105 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.253-201ENST00000364562 112 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.418-201ENST00000384029 102 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.439-201ENST00000384119 94 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.527-201ENST00000384573 102 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 MIR215-201ENST00000384858 110 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 MIR520G-201ENST00000385064 90 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 MIR653-201ENST00000385279 96 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.602-201ENST00000410535 92 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 AL390729.2-201ENST00000416137 156 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 MLLT10P1-201ENST00000418346 262 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 AC005042.3-201ENST00000453230 174 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 U8.20-201ENST00000459445 131 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 RPL39P38-201ENST00000467018 153 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 AC048334.1-201ENST00000477975 159 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 AC117454.1-201ENST00000491120 168 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-947P-201ENST00000516264 106 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 RN7SKP88-201ENST00000516847 250 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-897P-201ENST00000517135 105 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 AC019288.1-201ENST00000557918 224 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 MIR4300-201ENST00000581016 96 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 MIR3171-201ENST00000584270 74 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 AC011373.1-201ENST00000607270 237 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 7SK.8-201ENST00000612110 250 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 7SK.11-201ENST00000615477 250 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 RMST_2.1-201ENST00000617263 136 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 7SK.13-201ENST00000622040 250 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 AC090574.1-201ENST00000623186 233 ntBASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV40A0A0B4J280 SNORD114-7-201ENST00000362520 77 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.341-201ENST00000365341 102 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-42P-201ENST00000384165 107 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 MIR516B2-201ENST00000385190 85 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 RNA5SP482-201ENST00000391269 118 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 MRPL35P3-201ENST00000421557 364 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 ELOCP20-201ENST00000422460 345 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 HSPE1P25-201ENST00000455484 251 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 RPL30P7-201ENST00000479312 323 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.711-201ENST00000516993 102 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.715-201ENST00000517082 110 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 MIR3192-201ENST00000584920 77 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 AC103810.9-201ENST00000606688 112 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 AL096861.1-201ENST00000610899 123 ntBASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
TRAV40A0A0B4J280 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 SNORD113-8-201ENST00000363497 74 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.214-201ENST00000364201 112 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 SNORD50B-201ENST00000364995 70 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.383-201ENST00000383855 97 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.462-201ENST00000384268 102 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-163P-201ENST00000384396 106 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 MIR522-201ENST00000385071 87 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 SNORA26.5-201ENST00000391215 123 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 AC022028.1-201ENST00000412054 408 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 RPL21P38-201ENST00000418090 167 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 MTCO2P12-201ENST00000427426 682 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 MTND5P22-201ENST00000458380 195 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.631-201ENST00000459607 101 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 HMGN1P10-201ENST00000474557 553 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 SNORA70.12-201ENST00000516084 153 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 AC024405.2-202ENST00000532731 184 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 AL162424.1-201ENST00000602325 221 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 AC120024.3-201ENST00000603167 156 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 AC005972.2-201ENST00000604690 348 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 SNORA28-201ENST00000606769 126 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 MIR6788-201ENST00000618842 66 ntBASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.77□□□□□ -2.29
TRAV40A0A0B4J280 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 snoU2_19.2-201ENST00000363024 80 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.368-201ENST00000365547 113 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.389-201ENST00000383924 113 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 Y_RNA.424-201ENST00000384063 103 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 SNORD63-201ENST00000384262 68 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-1065P-201ENST00000384513 106 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 MIR1298-201ENST00000408783 112 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 SUMO1P2-201ENST00000452524 304 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 RPS26P48-201ENST00000491713 339 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 MRPS35P2-201ENST00000508242 191 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 RNU6-496P-201ENST00000516145 99 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 RNU7-28P-201ENST00000516759 62 ntBASIC0.76□□□□□ -2.29
TRAV40A0A0B4J280 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms