Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 Gm18025-201ENSMUST00000221733 862 ntBASIC12.32□□□□□ -0.44
PdfS4R2K0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PdfS4R2K0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.32□□□□□ -0.44
PdfS4R2K0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PdfS4R2K0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PdfS4R2K0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.31□□□□□ -0.44
PdfS4R2K0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PdfS4R2K0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PdfS4R2K0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.3□□□□□ -0.44
PdfS4R2K0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.3□□□□□ -0.44
PdfS4R2K0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PdfS4R2K0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PdfS4R2K0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
PdfS4R2K0 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.3□□□□□ -0.44
PdfS4R2K0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PdfS4R2K0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.3□□□□□ -0.44
PdfS4R2K0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms