Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb1S4R1E0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.56□□□□□ -0.08
H2afb1S4R1E0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Gm27011-201ENSMUST00000182352 972 ntBASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb1S4R1E0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Gm7370-201ENSMUST00000219471 767 ntBASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms